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  "author": "[{\"given_name\": \"Flurin\", \"name\": \"Leugger\", 
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  "author": "[{\"given_name\": \"Flurin\", \"name\": \"Leugger\", 
            
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\"email\": \"flurin.leugger@usys.ethz.ch\", \"data_credit\": [], 
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\"email\": \"flurin.leugger@usys.ethz.ch\", \"data_credit\": [], 
            
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\"identifier\": \"\", \"affiliation\": \"WSL / ETH\"}, 
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\"identifier\": \"\", \"affiliation\": \"WSL / ETH\"}, 
            
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{\"given_name\": \"Michel\", \"name\": \"Schmidlin\", \"email\": 
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{\"given_name\": \"Michel\", \"name\": \"Schmidlin\", \"email\": 
            
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\"michel.schmidlin@usys.ethz.ch\", \"data_credit\": [], 
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\"michel.schmidlin@usys.ethz.ch\", \"data_credit\": [], 
            
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\"identifier\": \"\", \"affiliation\": \"ETH / WSL\"}, 
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\"identifier\": \"\", \"affiliation\": \"ETH / WSL\"}, 
            
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{\"given_name\": \"Martina\", \"name\": \"L\\u00fcthi\", \"email\": 
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{\"given_name\": \"Martina\", \"name\": \"L\\u00fcthi\", \"email\": 
            
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\"martina.luethi@usys.ethz.ch\", \"data_credit\": [], \"identifier\": 
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\"martina.luethi@usys.ethz.ch\", \"data_credit\": [], \"identifier\": 
            
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\"\", \"affiliation\": \"ETH / WSL\"}, {\"given_name\": \"Zacharias\", 
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\"\", \"affiliation\": \"ETH / WSL\"}, {\"given_name\": \"Zacharias\", 
            
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\"name\": \"Kontarakis\", \"email\": 
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\"name\": \"Kontarakis\", \"email\": 
            
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\"zacharias.kontarakis@fgcz.ethz.ch\", \"data_credit\": [], 
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\"zacharias.kontarakis@fgcz.ethz.ch\", \"data_credit\": [], 
            
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\"identifier\": \"\", \"affiliation\": \"ETH\"}, {\"given_name\": 
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\"identifier\": \"\", \"affiliation\": \"ETH\"}, {\"given_name\": 
            
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\"Lo\\u00efc\", \"name\": \"Pellissier\", \"email\": 
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\"Lo\\u00efc\", \"name\": \"Pellissier\", \"email\": 
            
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\"loic.pellissier@usys.ethz.ch\", \"data_credit\": [], \"identifier\": 
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\"loic.pellissier@usys.ethz.ch\", \"data_credit\": [], \"identifier\": 
            
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\"0000-0002-2289-8259 \", \"affiliation\": \"ETHZ | Department of 
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\"0000-0002-2289-8259 \", \"affiliation\": \"ETHZ | Department of 
            
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Environmental Systems Science | Institute of Terrestrial Ecosystems | 
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Environmental Systems Science | Institute of Terrestrial Ecosystems | 
            
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Landscape Ecology\"}]",
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Landscape Ecology\"}]",
            
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  "author_email": null,
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  "date": 
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  "date": 
            
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:\"collected\",\"date\":\"2022-05-01\",\"end_date\":\"2022-06-30\"}]",
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:\"collected\",\"date\":\"2022-05-01\",\"end_date\":\"2022-06-30\"}]",
            
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  "doi": "10.16904/envidat.499",
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  "doi": "10.16904/envidat.499",
            
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  "funding": 
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  "funding": 
            
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stitution\":\"WSL\",\"grant_number\":\"\",\"institution_url\":\"\"}]",
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stitution\":\"WSL\",\"grant_number\":\"\",\"institution_url\":\"\"}]",
            
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  "license_id": "wsl-data",
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  "license_id": "wsl-data",
            
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  "license_title": "WSL Data Policy",
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  "license_title": "WSL Data Policy",
            
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  "license_url": 
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  "license_url": 
            
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ps://www.wsl.ch/en/about-wsl/programmes-and-initiatives/envidat.html",
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ps://www.wsl.ch/en/about-wsl/programmes-and-initiatives/envidat.html",
            
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  "maintainer": 
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  "maintainer": 
            
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ugger@usys.ethz.ch\",\"given_name\":\"Flurin\",\"name\":\"Leugger\"}",
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ugger@usys.ethz.ch\",\"given_name\":\"Flurin\",\"name\":\"Leugger\"}",
            
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  "metadata_created": "2024-04-02T10:43:13.706095",
            
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  "metadata_modified": "2024-04-04T11:51:12.327895",
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  "metadata_modified": "2024-11-19T11:54:07.628465",
            
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  "name": "crispr-dx-assays--amphibians-canton-of-aargau",
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  "name": "crispr-dx-assays--amphibians-canton-of-aargau",
            
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  "notes": "# General description\n\nThis data set was created for the 
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  "notes": "# General description\n\nThis data set was created for the 
            
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case study on CRISPR-Dx assays to monitor amphibians with eDNA (in the 
40
case study on CRISPR-Dx assays to monitor amphibians with eDNA (in the 
            
41
Canton of Aargau, Switzerland). It encompasses a the environmental DNA 
41
Canton of Aargau, Switzerland). It encompasses a the environmental DNA 
            
42
(eDNA) sampling metadata, the average CRISPR-Dx assay readout per 
42
(eDNA) sampling metadata, the average CRISPR-Dx assay readout per 
            
43
extract, the summarized traditional monitoring data and the permits 
43
extract, the summarized traditional monitoring data and the permits 
            
44
received for sampling and data usage.\n\n**Corresponding author**: 
44
received for sampling and data usage.\n\n**Corresponding author**: 
            
45
Flurin Leugger (flurinleugger@gmail.com)\n\n# Description of the zip 
45
Flurin Leugger (flurinleugger@gmail.com)\n\n# Description of the zip 
            
46
folders\n\n- **CRISRP_5km**:  CRISPR-Dx fluorescence readout and 
46
folders\n\n- **CRISRP_5km**:  CRISPR-Dx fluorescence readout and 
            
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summary per extract and eDNA metadata. The coordinates are provided at 
47
summary per extract and eDNA metadata. The coordinates are provided at 
            
48
5km resolution (randomly sampled points within 5km buffer around 
48
5km resolution (randomly sampled points within 5km buffer around 
            
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precise location) to meet the agreement with Canton of Aargau.\n- 
49
precise location) to meet the agreement with Canton of Aargau.\n- 
            
50
**traditional_monitoring**: Summarized traditional monitoring data per 
50
**traditional_monitoring**: Summarized traditional monitoring data per 
            
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location, provided by Canton of Aargau\n- **CRISPR**: CRISPR-Dx 
51
location, provided by Canton of Aargau\n- **CRISPR**: CRISPR-Dx 
            
52
fluorescence readout and summary per extract and eDNA metadata. This 
52
fluorescence readout and summary per extract and eDNA metadata. This 
            
53
folder contains the exact sampling coordinates and thus cannot be 
53
folder contains the exact sampling coordinates and thus cannot be 
            
54
shared publicly to meet the agreement with Canton of Aargau. It can 
54
shared publicly to meet the agreement with Canton of Aargau. It can 
            
55
only be shared upon reasonable request.\n\n- The permits are provided 
55
only be shared upon reasonable request.\n\n- The permits are provided 
            
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on request by the authors and are not made available publicly together 
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on request by the authors and are not made available publicly together 
            
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with the data.",
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with the data.",
            
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    "created": "2018-12-01T11:59:01.791513",
            
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    "description": "We are an international research team with diverse 
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    "description": "We are an international research team with diverse 
            
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scientific expertise and backgrounds, connected by the goal to 
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scientific expertise and backgrounds, connected by the goal to 
            
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understand biodiversity. We study the mechanisms that shape 
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understand biodiversity. We study the mechanisms that shape 
            
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biodiversity patterns across spatial and temporal scales - in both 
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biodiversity patterns across spatial and temporal scales - in both 
            
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terrestrial and aquatic ecosystems -\u200bsuch as mountain ranges and 
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terrestrial and aquatic ecosystems -\u200bsuch as mountain ranges and 
            
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tropical reefs. We use an interdisciplinary approach, whereby we 
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tropical reefs. We use an interdisciplinary approach, whereby we 
            
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bridge ecology, evolution, Earth history and global change.\r\nTo make 
69
bridge ecology, evolution, Earth history and global change.\r\nTo make 
            
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these connections, we collect data through biological monitoring, 
70
these connections, we collect data through biological monitoring, 
            
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environmental DNA methods, remote sensing, and field sampling, and use 
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environmental DNA methods, remote sensing, and field sampling, and use 
            
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these data to answer questions with statistical and 
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these data to answer questions with statistical and 
            
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process-\u200bbased models of biological diversity.\r\nOur group is 
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process-\u200bbased models of biological diversity.\r\nOur group is 
            
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affiliated with ETH and WSL, but is also associated with Agroscope, 
74
affiliated with ETH and WSL, but is also associated with Agroscope, 
            
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EAWAG, the European Joint Research Centre and Vogelwarte.",
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EAWAG, the European Joint Research Centre and Vogelwarte.",
            
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https://doi.org/10.1111/1755-0998.14009",
            
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(summarized), incl. sampling, extraction and amplification 
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(summarized), incl. sampling, extraction and amplification 
            
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metadata\n\nCoordinates in the CRISPeD_EnviDat_fw_CHE_AG_2022.csv are 
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randomized per location within a buffer of 5km to meet the agreement 
            
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with Canton of Aargau.",
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  ],
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  ],
            
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  "title": "CRISPR-Dx assays and environmental DNA to monitor 
266
  "title": "CRISPR-Dx assays and environmental DNA to monitor 
            
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amphibians",
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}
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}