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  "author": "[{\"given_name\": \"Flurin\", \"name\": \"Leugger\", 
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  "author": "[{\"given_name\": \"Flurin\", \"name\": \"Leugger\", 
            
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\"email\": \"flurin.leugger@usys.ethz.ch\", \"data_credit\": [], 
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\"email\": \"flurin.leugger@usys.ethz.ch\", \"data_credit\": [], 
            
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\"identifier\": \"\", \"affiliation\": \"WSL / ETH\"}, 
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\"identifier\": \"\", \"affiliation\": \"WSL / ETH\"}, 
            
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{\"given_name\": \"Michel\", \"name\": \"Schmidlin\", \"email\": 
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{\"given_name\": \"Michel\", \"name\": \"Schmidlin\", \"email\": 
            
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\"michel.schmidlin@usys.ethz.ch\", \"data_credit\": [], 
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\"michel.schmidlin@usys.ethz.ch\", \"data_credit\": [], 
            
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\"identifier\": \"\", \"affiliation\": \"ETH / WSL\"}, 
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\"identifier\": \"\", \"affiliation\": \"ETH / WSL\"}, 
            
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{\"given_name\": \"Martina\", \"name\": \"L\\u00fcthi\", \"email\": 
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{\"given_name\": \"Martina\", \"name\": \"L\\u00fcthi\", \"email\": 
            
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\"martina.luethi@usys.ethz.ch\", \"data_credit\": [], \"identifier\": 
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\"martina.luethi@usys.ethz.ch\", \"data_credit\": [], \"identifier\": 
            
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\"\", \"affiliation\": \"ETH / WSL\"}, {\"given_name\": \"Zacharias\", 
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\"\", \"affiliation\": \"ETH / WSL\"}, {\"given_name\": \"Zacharias\", 
            
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\"name\": \"Kontarakis\", \"email\": 
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\"name\": \"Kontarakis\", \"email\": 
            
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\"zacharias.kontarakis@fgcz.ethz.ch\", \"data_credit\": [], 
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\"zacharias.kontarakis@fgcz.ethz.ch\", \"data_credit\": [], 
            
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\"identifier\": \"\", \"affiliation\": \"ETH\"}, {\"given_name\": 
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\"identifier\": \"\", \"affiliation\": \"ETH\"}, {\"given_name\": 
            
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\"Lo\\u00efc\", \"name\": \"Pellissier\", \"email\": 
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\"Lo\\u00efc\", \"name\": \"Pellissier\", \"email\": 
            
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\"loic.pellissier@usys.ethz.ch\", \"data_credit\": [], \"identifier\": 
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\"loic.pellissier@usys.ethz.ch\", \"data_credit\": [], \"identifier\": 
            
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\"0000-0002-2289-8259 \", \"affiliation\": \"ETHZ | Department of 
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\"0000-0002-2289-8259 \", \"affiliation\": \"ETHZ | Department of 
            
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Environmental Systems Science | Institute of Terrestrial Ecosystems | 
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Environmental Systems Science | Institute of Terrestrial Ecosystems | 
            
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Landscape Ecology\"}]",
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Landscape Ecology\"}]",
            
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  "date": 
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  "date": 
            
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:\"collected\",\"date\":\"2022-05-01\",\"end_date\":\"2022-06-30\"}]",
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:\"collected\",\"date\":\"2022-05-01\",\"end_date\":\"2022-06-30\"}]",
            
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  "doi": "10.16904/envidat.499",
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  "doi": "10.16904/envidat.499",
            
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  "funding": 
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  "funding": 
            
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stitution\":\"WSL\",\"grant_number\":\"\",\"institution_url\":\"\"}]",
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stitution\":\"WSL\",\"grant_number\":\"\",\"institution_url\":\"\"}]",
            
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  "id": "5925a83c-d99d-4d91-b5f5-eb57f208f5fa",
            
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  "license_id": "wsl-data",
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  "license_id": "wsl-data",
            
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  "license_title": "WSL Data Policy",
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  "license_title": "WSL Data Policy",
            
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  "license_url": 
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  "license_url": 
            
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ps://www.wsl.ch/en/about-wsl/programmes-and-initiatives/envidat.html",
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ps://www.wsl.ch/en/about-wsl/programmes-and-initiatives/envidat.html",
            
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  "maintainer": 
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  "maintainer": 
            
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ugger@usys.ethz.ch\",\"given_name\":\"Flurin\",\"name\":\"Leugger\"}",
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ugger@usys.ethz.ch\",\"given_name\":\"Flurin\",\"name\":\"Leugger\"}",
            
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  "metadata_created": "2024-04-02T10:43:13.706095",
            
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  "metadata_modified": "2024-04-04T10:53:03.694839",
            
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  "name": "crispr-dx-assays--amphibians-canton-of-aargau",
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  "name": "crispr-dx-assays--amphibians-canton-of-aargau",
            
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  "notes": "# General description\n\nThis data set was created for the 
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  "notes": "# General description\n\nThis data set was created for the 
            
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case study on CRISPR-Dx assays to monitor amphibians with eDNA (in the 
40
case study on CRISPR-Dx assays to monitor amphibians with eDNA (in the 
            
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Canton of Aargau, Switzerland). It encompasses a the environmental DNA 
41
Canton of Aargau, Switzerland). It encompasses a the environmental DNA 
            
42
(eDNA) sampling metadata, the average CRISPR-Dx assay readout per 
42
(eDNA) sampling metadata, the average CRISPR-Dx assay readout per 
            
43
extract, the summarized traditional monitoring data and the permits 
43
extract, the summarized traditional monitoring data and the permits 
            
44
received for sampling and data usage.\n\n**Corresponding author**: 
44
received for sampling and data usage.\n\n**Corresponding author**: 
            
45
Flurin Leugger (flurinleugger@gmail.com)\n\n# Description of the zip 
45
Flurin Leugger (flurinleugger@gmail.com)\n\n# Description of the zip 
            
t
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folders\n\n- **CRISPR**: CRISPR-Dx fluorescence readout and summary 
t
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folders\n- **CRISRP_5km**:  CRISPR-Dx fluorescence readout and summary 
            
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per extract and eDNA metadata\n- **traditional_monitoring**: 
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per extract and eDNA metadata. The coordinates are provided at 5km 
            
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Summarized traditional monitoring data per location, provided by 
48
resolution (randomly sampled points within 5km buffer around \n- 
            
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Canton of Aargau\n\nThe permits are provided on request by the authors 
49
**traditional_monitoring**: Summarized traditional monitoring data per 
            
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location, provided by Canton of Aargau\n- **CRISPR**: CRISPR-Dx 
            
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fluorescence readout and summary per extract and eDNA metadata. This 
            
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folder contains the exact sampling coordinates and thus cannot be 
            
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shared publicly to meet the agreement with Canton of Aargau.\n\nThe 
            
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permits are provided on request by the authors and are not made 
            
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and are not made available publicly together with the data.",
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available publicly together with the data.",
            
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  "organization": {
            
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    "created": "2018-12-01T11:59:01.791513",
            
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    "description": "We are an international research team with diverse 
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    "description": "We are an international research team with diverse 
            
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scientific expertise and backgrounds, connected by the goal to 
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scientific expertise and backgrounds, connected by the goal to 
            
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understand biodiversity. We study the mechanisms that shape 
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understand biodiversity. We study the mechanisms that shape 
            
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biodiversity patterns across spatial and temporal scales - in both 
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biodiversity patterns across spatial and temporal scales - in both 
            
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terrestrial and aquatic ecosystems -\u200bsuch as mountain ranges and 
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terrestrial and aquatic ecosystems -\u200bsuch as mountain ranges and 
            
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tropical reefs. We use an interdisciplinary approach, whereby we 
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tropical reefs. We use an interdisciplinary approach, whereby we 
            
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bridge ecology, evolution, Earth history and global change.\r\nTo make 
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bridge ecology, evolution, Earth history and global change.\r\nTo make 
            
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these connections, we collect data through biological monitoring, 
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these connections, we collect data through biological monitoring, 
            
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environmental DNA methods, remote sensing, and field sampling, and use 
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environmental DNA methods, remote sensing, and field sampling, and use 
            
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these data to answer questions with statistical and 
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these data to answer questions with statistical and 
            
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process-\u200bbased models of biological diversity.\r\nOur group is 
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process-\u200bbased models of biological diversity.\r\nOur group is 
            
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affiliated with ETH and WSL, but is also associated with Agroscope, 
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affiliated with ETH and WSL, but is also associated with Agroscope, 
            
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EAWAG, the European Joint Research Centre and Vogelwarte.",
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EAWAG, the European Joint Research Centre and Vogelwarte.",
            
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      "id": "db7d5622-d1fc-4d24-91f7-73842c6743b6",
            
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      "name": "ENVIRONMENTAL DNA",
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      "name": "ENVIRONMENTAL DNA",
            
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      "state": "active",
            
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      "name": "MONITORING",
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    }
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    }
            
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  ],
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  ],
            
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  "title": "CRISPR-Dx assays and environmental DNA to monitor 
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  "title": "CRISPR-Dx assays and environmental DNA to monitor 
            
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amphibians",
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amphibians",
            
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  "type": "dataset",
            
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  "url": null
            
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}
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}