Changes

              
    

          
          
        
        

            
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{
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{
            
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  "author": "[{\"affiliation\": \"WSL\", \"affiliation_02\": \"\", 
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  "author": "[{\"affiliation\": \"WSL\", \"affiliation_02\": \"\", 
            
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\"affiliation_03\": \"\", \"data_credit\": [\"validation\", 
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\"affiliation_03\": \"\", \"data_credit\": [\"validation\", 
            
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\"curation\", \"publication\"], \"email\": \"merin.chacko@wsl.ch\", 
4
\"curation\", \"publication\"], \"email\": \"merin.chacko@wsl.ch\", 
            
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\"given_name\": \"Merin\", \"identifier\": \"0000-0002-6069-4281\", 
5
\"given_name\": \"Merin\", \"identifier\": \"0000-0002-6069-4281\", 
            
6
\"name\": \"Reji Chacko\"}, {\"affiliation\": \"WSL\", 
6
\"name\": \"Reji Chacko\"}, {\"affiliation\": \"WSL\", 
            
7
\"affiliation_02\": \"\", \"affiliation_03\": \"\", \"data_credit\": 
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\"affiliation_02\": \"\", \"affiliation_03\": \"\", \"data_credit\": 
            
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[\"collection\", \"curation\", \"publication\"], \"email\": 
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[\"collection\", \"curation\", \"publication\"], \"email\": 
            
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\"fabian.fopp@wsl.ch\", \"given_name\": \"Fabian\", \"identifier\": 
9
\"fabian.fopp@wsl.ch\", \"given_name\": \"Fabian\", \"identifier\": 
            
10
\"0000-0003-0648-8484\", \"name\": \"Fopp\"}, {\"affiliation\": \"WSL, 
10
\"0000-0003-0648-8484\", \"name\": \"Fopp\"}, {\"affiliation\": \"WSL, 
            
11
ETH\", \"affiliation_02\": \"\", \"affiliation_03\": \"\", 
11
ETH\", \"affiliation_02\": \"\", \"affiliation_03\": \"\", 
            
12
\"data_credit\": [\"collection\", \"publication\"], \"email\": 
12
\"data_credit\": [\"collection\", \"publication\"], \"email\": 
            
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\"thomas.keggin@usys.ethz.ch\", \"given_name\": \"Thomas\", 
13
\"thomas.keggin@usys.ethz.ch\", \"given_name\": \"Thomas\", 
            
14
\"identifier\": \"\", \"name\": \"Keggin\"}, {\"affiliation\": \"Unit 
14
\"identifier\": \"\", \"name\": \"Keggin\"}, {\"affiliation\": \"Unit 
            
15
of Land Change Science, Swiss Federal Research Institute WSL, 
15
of Land Change Science, Swiss Federal Research Institute WSL, 
            
16
Birmensdorf, Switzerland\", \"affiliation_02\": \"\", 
16
Birmensdorf, Switzerland\", \"affiliation_02\": \"\", 
            
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\"affiliation_03\": \"\", \"data_credit\": [\"collection\", 
17
\"affiliation_03\": \"\", \"data_credit\": [\"collection\", 
            
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\"publication\"], \"email\": \"conor.waldock@unibe.ch\", 
18
\"publication\"], \"email\": \"conor.waldock@unibe.ch\", 
            
19
\"given_name\": \"Conor\", \"identifier\": \"0000-0002-2818-9859\", 
19
\"given_name\": \"Conor\", \"identifier\": \"0000-0002-2818-9859\", 
            
20
\"name\": \"Waldock\"}, {\"affiliation\": \"WSL, ETH\", 
20
\"name\": \"Waldock\"}, {\"affiliation\": \"WSL, ETH\", 
            
21
\"affiliation_02\": \"\", \"affiliation_03\": \"\", \"data_credit\": 
21
\"affiliation_02\": \"\", \"affiliation_03\": \"\", \"data_credit\": 
            
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[\"collection\", \"publication\"], \"email\": 
22
[\"collection\", \"publication\"], \"email\": 
            
23
\"eilishrichards@gmail.com\", \"given_name\": \"Eilish\", 
23
\"eilishrichards@gmail.com\", \"given_name\": \"Eilish\", 
            
24
\"identifier\": \"\", \"name\": \"Richards\"}, {\"affiliation\": 
24
\"identifier\": \"\", \"name\": \"Richards\"}, {\"affiliation\": 
            
25
\"Landscape Ecology, Institute of Terrestrial Ecosystems, ETH 
25
\"Landscape Ecology, Institute of Terrestrial Ecosystems, ETH 
            
26
Z\\u00fcrich, 8049 Z\\u00fcrich, Switzerland\", \"affiliation_02\": 
26
Z\\u00fcrich, 8049 Z\\u00fcrich, Switzerland\", \"affiliation_02\": 
            
27
\"\", \"affiliation_03\": \"\", \"data_credit\": [\"publication\", 
27
\"\", \"affiliation_03\": \"\", \"data_credit\": [\"publication\", 
            
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\"supervision\"], \"email\": \"loic.pellissier@wsl.ch\", 
28
\"supervision\"], \"email\": \"loic.pellissier@wsl.ch\", 
            
29
\"given_name\": \"Loic\", \"identifier\": \"0000-0002-2289-8259\", 
29
\"given_name\": \"Loic\", \"identifier\": \"0000-0002-2289-8259\", 
            
30
\"name\": \"Pellissier\"}]",
30
\"name\": \"Pellissier\"}]",
            
31
  "author_email": null,
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  "author_email": null,
            
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  "creator_user_id": "adc05669-b377-4101-b441-b9bcb92437df",
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  "creator_user_id": "adc05669-b377-4101-b441-b9bcb92437df",
            
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  "date": "[{\"date\": \"2020-06-22\", \"date_type\": \"collected\", 
33
  "date": "[{\"date\": \"2020-06-22\", \"date_type\": \"collected\", 
            
34
\"end_date\": \"2020-06-26\"}]",
34
\"end_date\": \"2020-06-26\"}]",
            
35
  "doi": "10.16904/envidat.409",
35
  "doi": "10.16904/envidat.409",
            
36
  "funding": "[{\"grant_number\": \"\", \"institution\": \"Swiss 
36
  "funding": "[{\"grant_number\": \"\", \"institution\": \"Swiss 
            
37
Federal Office of the Environment (FOEN)\", \"institution_url\": 
37
Federal Office of the Environment (FOEN)\", \"institution_url\": 
            
38
\"https://www.bafu.admin.ch/bafu/en/home.html\"}]",
38
\"https://www.bafu.admin.ch/bafu/en/home.html\"}]",
            
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  "groups": [],
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  "groups": [],
            
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  "id": "f1df9abc-3fb8-4253-83a8-733f712ef768",
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  "id": "f1df9abc-3fb8-4253-83a8-733f712ef768",
            
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  "isopen": true,
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  "isopen": true,
            
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  "language": "en",
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  "language": "en",
            
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  "license_id": "cc-by-sa",
43
  "license_id": "cc-by-sa",
            
44
  "license_title": "Creative Commons Attribution Share-Alike 
44
  "license_title": "Creative Commons Attribution Share-Alike 
            
45
(CC-BY-SA)",
45
(CC-BY-SA)",
            
46
  "license_url": "https://creativecommons.org/licenses/by-sa/4.0/",
46
  "license_url": "https://creativecommons.org/licenses/by-sa/4.0/",
            
47
  "maintainer": "{\"affiliation\": \"\", \"email\": 
47
  "maintainer": "{\"affiliation\": \"\", \"email\": 
            
48
\"merin.rejichacko@gmail.com\", \"given_name\": \"Merin\", 
48
\"merin.rejichacko@gmail.com\", \"given_name\": \"Merin\", 
            
49
\"identifier\": \"\", \"name\": \"Reji Chacko\"}",
49
\"identifier\": \"\", \"name\": \"Reji Chacko\"}",
            
50
  "maintainer_email": null,
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  "maintainer_email": null,
            
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  "metadata_created": "2023-06-06T19:26:17.207182",
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  "metadata_created": "2023-06-06T19:26:17.207182",
            
n
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  "metadata_modified": "2023-09-27T14:11:38.794514",
n
52
  "metadata_modified": "2023-09-27T15:40:41.489287",
            
53
  "name": "catchment-biodiversity-vaud-edna",
53
  "name": "catchment-biodiversity-vaud-edna",
            
54
  "notes": "This dataset contains the results of a five-day field 
54
  "notes": "This dataset contains the results of a five-day field 
            
55
excursion which the extent to which eDNA sampling can capture the 
55
excursion which the extent to which eDNA sampling can capture the 
            
56
diversity of a region with highly heterogeneous habitat patches across 
56
diversity of a region with highly heterogeneous habitat patches across 
            
57
a wide elevation gradient through multiple hydrological catchments of 
57
a wide elevation gradient through multiple hydrological catchments of 
            
58
the Swiss Alps. Using peristaltic pumps, we filtered 60 L of water at 
58
the Swiss Alps. Using peristaltic pumps, we filtered 60 L of water at 
            
59
five sites per catchment for a total volume of 1 800 L. Using an eDNA 
59
five sites per catchment for a total volume of 1 800 L. Using an eDNA 
            
60
metabarcoding approach focusing on vertebrates and plants, we detected 
60
metabarcoding approach focusing on vertebrates and plants, we detected 
            
61
86 vertebrate taxa spanning 41 families and 263 plant taxa spanning 79 
61
86 vertebrate taxa spanning 41 families and 263 plant taxa spanning 79 
            
62
families across ten catchments. This dataset includes two sets of 
62
families across ten catchments. This dataset includes two sets of 
            
63
data. The first (Genomic data) includes all the necessary data for the 
63
data. The first (Genomic data) includes all the necessary data for the 
            
64
bioinformatic pipeline, whereas the second (Analysis Figures) contains 
64
bioinformatic pipeline, whereas the second (Analysis Figures) contains 
            
65
tidied data and scripts for the reproduction of all figures/analyses 
65
tidied data and scripts for the reproduction of all figures/analyses 
            
66
in the article describing this study.",
66
in the article describing this study.",
            
67
  "num_resources": 3,
67
  "num_resources": 3,
            
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  "num_tags": 5,
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  "num_tags": 5,
            
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  "organization": {
69
  "organization": {
            
70
    "approval_status": "approved",
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    "approval_status": "approved",
            
71
    "created": "2018-12-01T11:59:01.791513",
71
    "created": "2018-12-01T11:59:01.791513",
            
n
72
    "description": "Our laboratory aims at understanding and 
n
72
    "description": "We are an international research team with diverse 
            
73
forecasting the response of biodiversity to landscape changes. We 
73
scientific expertise and backgrounds, connected by the goal to 
            
74
investigate the historical responses of species to past changes such 
74
understand biodiversity. We study the mechanisms that shape 
            
75
as plate tectonics or the glaciations of the Quaternary and 
75
biodiversity patterns across spatial and temporal scales - in both 
            
76
contemporary responses to ongoing global changes. We develop spatial 
76
terrestrial and aquatic ecosystems -\u200bsuch as mountain ranges and 
            
77
mechanistic models of biodiversity that account for processes such as 
77
tropical reefs. We use an interdisciplinary approach, whereby we 
            
78
dispersal and biotic interactions.",
78
bridge ecology, evolution, Earth history and global change.\r\nTo make 
            
79
these connections, we collect data through biological monitoring, 
            
80
environmental DNA methods, remote sensing, and field sampling, and use 
            
81
these data to answer questions with statistical and 
            
82
process-\u200bbased models of biological diversity.\r\nOur group is 
            
83
affiliated with ETH and WSL, but is also associated with Agroscope, 
            
84
EAWAG, the European Joint Research Centre and Vogelwarte.",
            
79
    "id": "153392ee-d556-4b16-a330-dedb177e87f9",
85
    "id": "153392ee-d556-4b16-a330-dedb177e87f9",
            
n
80
    "image_url": "2018-12-01-105921.8275952000px-LogoWSL.svg.png",
n
86
    "image_url": 
            
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le.ethz.ch/_jcr_content/orgbox/image.imageformat.logo.1254626489.png",
            
81
    "is_organization": true,
88
    "is_organization": true,
            
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    "name": "ele-group",
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    "name": "ele-group",
            
83
    "state": "active",
90
    "state": "active",
            
84
    "title": "Ecosystems and Landscape Evolution",
91
    "title": "Ecosystems and Landscape Evolution",
            
85
    "type": "organization"
92
    "type": "organization"
            
86
  },
93
  },
            
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  "owner_org": "153392ee-d556-4b16-a330-dedb177e87f9",
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  "owner_org": "153392ee-d556-4b16-a330-dedb177e87f9",
            
88
  "private": false,
95
  "private": false,
            
89
  "publication": "{\"publication_year\": \"2023\", \"publisher\": 
96
  "publication": "{\"publication_year\": \"2023\", \"publisher\": 
            
90
\"EnviDat\"}",
97
\"EnviDat\"}",
            
t
91
  "publication_state": "reserved",
t
98
  "publication_state": "published",
            
92
  "related_datasets": "Please see the related publication for a 
99
  "related_datasets": "Please see the related publication for a 
            
93
summary of related datasets. \r\n\r\nReji Chacko, M., Altermatt, F., 
100
summary of related datasets. \r\n\r\nReji Chacko, M., Altermatt, F., 
            
94
Fopp, F. et al. Catchment-based sampling of river eDNA integrates 
101
Fopp, F. et al. Catchment-based sampling of river eDNA integrates 
            
95
terrestrial and aquatic biodiversity of alpine landscapes. Oecologia 
102
terrestrial and aquatic biodiversity of alpine landscapes. Oecologia 
            
96
(2023). https://doi.org/10.1007/s00442-023-05428-4 ",
103
(2023). https://doi.org/10.1007/s00442-023-05428-4 ",
            
97
  "related_publications": "This dataset corrresponds to the study 
104
  "related_publications": "This dataset corrresponds to the study 
            
98
described in the paper: \r\n\r\nReji Chacko, M., Altermatt, F., Fopp, 
105
described in the paper: \r\n\r\nReji Chacko, M., Altermatt, F., Fopp, 
            
99
F. et al. Catchment-based sampling of river eDNA integrates 
106
F. et al. Catchment-based sampling of river eDNA integrates 
            
100
terrestrial and aquatic biodiversity of alpine landscapes. Oecologia 
107
terrestrial and aquatic biodiversity of alpine landscapes. Oecologia 
            
101
(2023). https://doi.org/10.1007/s00442-023-05428-4\r\n\r\nThis dataset 
108
(2023). https://doi.org/10.1007/s00442-023-05428-4\r\n\r\nThis dataset 
            
102
is part of the trophiCH project: 
109
is part of the trophiCH project: 
            
103
https://ele.ethz.ch/research/technology-modelling/trophich.html",
110
https://ele.ethz.ch/research/technology-modelling/trophich.html",
            
104
  "relationships_as_object": [],
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  "relationships_as_object": [],
            
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  "relationships_as_subject": [],
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  "relationships_as_subject": [],
            
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  "resource_type": "dataset",
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  "resource_type": "dataset",
            
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  "resource_type_general": "dataset",
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  "resource_type_general": "dataset",
            
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  "resources": [
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  "resources": [
            
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    {
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    {
            
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      "cache_last_updated": null,
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      "cache_last_updated": null,
            
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      "cache_url": null,
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      "cache_url": null,
            
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      "created": "2023-06-06T19:52:20.702048",
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      "created": "2023-06-06T19:52:20.702048",
            
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      "description": "Information concerning the locations and times 
120
      "description": "Information concerning the locations and times 
            
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of sampling, as well as the identity of the samplers and relevant 
121
of sampling, as well as the identity of the samplers and relevant 
            
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comments.",
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comments.",
            
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      "doi": "",
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      "doi": "",
            
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      "format": ".csv",
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      "format": ".csv",
            
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      "hash": "",
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      "hash": "",
            
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      "id": "4d6f2c3d-0ae9-473e-8023-adf6e99d4aa7",
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      "id": "4d6f2c3d-0ae9-473e-8023-adf6e99d4aa7",
            
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      "last_modified": null,
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      "last_modified": null,
            
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      "metadata_modified": "2023-06-06T19:52:20.686822",
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      "metadata_modified": "2023-06-06T19:52:20.686822",
            
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      "mimetype": null,
            
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      "mimetype_inner": null,
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      "mimetype_inner": null,
            
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      "name": "Field Metadata",
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      "name": "Field Metadata",
            
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      "package_id": "f1df9abc-3fb8-4253-83a8-733f712ef768",
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      "package_id": "f1df9abc-3fb8-4253-83a8-733f712ef768",
            
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      "position": 0,
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      "position": 0,
            
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      "publication_state": "",
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      "publication_state": "",
            
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      "resource_size": "{\"size_value\": \"\", \"size_units\": 
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      "resource_size": "{\"size_value\": \"\", \"size_units\": 
            
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\"kb\"}",
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\"kb\"}",
            
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      "resource_type": null,
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      "resource_type": null,
            
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      "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", 
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      "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", 
            
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\"shared_secret\": \"\"}",
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\"shared_secret\": \"\"}",
            
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      "size": 6661,
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      "size": 6661,
            
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      "state": "active",
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      "state": "active",
            
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      "url": 
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      "url": 
            
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rce/4d6f2c3d-0ae9-473e-8023-adf6e99d4aa7/download/field_metadata.csv",
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rce/4d6f2c3d-0ae9-473e-8023-adf6e99d4aa7/download/field_metadata.csv",
            
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      "url_type": "upload"
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      "url_type": "upload"
            
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    },
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    },
            
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    {
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    {
            
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      "cache_last_updated": null,
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      "cache_last_updated": null,
            
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      "cache_url": null,
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      "cache_url": null,
            
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      "created": "2023-06-06T19:38:19.156383",
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      "created": "2023-06-06T19:38:19.156383",
            
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      "description": "Fastq files, primer descriptions and the final 
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      "description": "Fastq files, primer descriptions and the final 
            
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output dataset.",
151
output dataset.",
            
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      "doi": "",
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      "doi": "",
            
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      "format": "link",
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      "format": "link",
            
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      "hash": "",
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      "hash": "",
            
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      "id": "de158722-73f9-4b69-b72b-9b9ed739705f",
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      "id": "de158722-73f9-4b69-b72b-9b9ed739705f",
            
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      "last_modified": "2023-06-09T15:42:18.393000",
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      "last_modified": "2023-06-09T15:42:18.393000",
            
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      "metadata_modified": "2023-06-09T13:42:19.197899",
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      "metadata_modified": "2023-06-09T13:42:19.197899",
            
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      "mimetype": null,
            
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      "mimetype_inner": null,
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      "mimetype_inner": null,
            
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      "name": "Genomic data",
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      "name": "Genomic data",
            
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      "package_id": "f1df9abc-3fb8-4253-83a8-733f712ef768",
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      "package_id": "f1df9abc-3fb8-4253-83a8-733f712ef768",
            
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      "position": 1,
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      "position": 1,
            
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      "publication_state": "",
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      "publication_state": "",
            
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      "resource_size": 
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      "resource_size": 
            
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