Changes
On December 4, 2024 at 12:29:56 PM UTC, Heike Lischke:
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Updated description of resource InstructionsForRunningTheSimulations.pdf in Case study applications demonstrating the use and potential of the TreeMig framework v1 to
A condensed instruction for running the presented simulations.
-
Changed value of field
resource_size
of resource InstructionsForRunningTheSimulations.pdf to{"size_value":"","size_units":""}
(previously{"size_value":"","size_units":"kb"}
) in Case study applications demonstrating the use and potential of the TreeMig framework v1
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23 | "doi": "10.16904/envidat.531", | 23 | "doi": "10.16904/envidat.531", | ||
24 | "funding": "[{\"institution\":\"WSL internal | 24 | "funding": "[{\"institution\":\"WSL internal | ||
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26 | GUI\u201d\",\"institution_url\":\"\"}]", | 26 | GUI\u201d\",\"institution_url\":\"\"}]", | ||
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38 | "name": | 38 | "name": | ||
39 | pplications-demonstrating-the-use-and-potential-of-the-treemig-frame", | 39 | pplications-demonstrating-the-use-and-potential-of-the-treemig-frame", | ||
40 | "notes": "The [TreeMig framework](https://treemig.wsl.ch/en/) allows | 40 | "notes": "The [TreeMig framework](https://treemig.wsl.ch/en/) allows | ||
41 | for an easy application of the forest landscape model TreeMig for | 41 | for an easy application of the forest landscape model TreeMig for | ||
42 | simulating forest dynamics in space under changing environmental and | 42 | simulating forest dynamics in space under changing environmental and | ||
43 | land use conditions.\n\nHere, case study examples in Switzerland are | 43 | land use conditions.\n\nHere, case study examples in Switzerland are | ||
44 | given that simulate the dynamics and spatial spread of competing tree | 44 | given that simulate the dynamics and spatial spread of competing tree | ||
45 | species in a region in Switzerland, the invasion of a hypothetical | 45 | species in a region in Switzerland, the invasion of a hypothetical | ||
46 | invasive tree species, and the control of this species via a | 46 | invasive tree species, and the control of this species via a | ||
47 | management model coupled to TreeMig. The datasets consist of the | 47 | management model coupled to TreeMig. The datasets consist of the | ||
48 | installation- and GUI starting-script, example environmental input | 48 | installation- and GUI starting-script, example environmental input | ||
49 | data for Switzerland, the simulation environment, and further | 49 | data for Switzerland, the simulation environment, and further | ||
50 | R-scripts for running the simulations and plotting the simulation | 50 | R-scripts for running the simulations and plotting the simulation | ||
51 | results directly from R and for coupling TreeMig to the forest | 51 | results directly from R and for coupling TreeMig to the forest | ||
52 | management model.", | 52 | management model.", | ||
53 | "num_resources": 4, | 53 | "num_resources": 4, | ||
54 | "num_tags": 11, | 54 | "num_tags": 11, | ||
55 | "organization": { | 55 | "organization": { | ||
56 | "approval_status": "approved", | 56 | "approval_status": "approved", | ||
57 | "created": "2018-05-31T14:24:18.890912", | 57 | "created": "2018-05-31T14:24:18.890912", | ||
58 | "description": "The dynamic macroecology group studies different | 58 | "description": "The dynamic macroecology group studies different | ||
59 | aspects of ecology on large spatial and temporal scales, from the | 59 | aspects of ecology on large spatial and temporal scales, from the | ||
60 | Pleistocene to the Anthropocene, related to the question: \u201cHow do | 60 | Pleistocene to the Anthropocene, related to the question: \u201cHow do | ||
61 | species and their traits change in space and time, particularly with | 61 | species and their traits change in space and time, particularly with | ||
62 | global change?\u201d", | 62 | global change?\u201d", | ||
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64 | "image_url": "", | 64 | "image_url": "", | ||
65 | "is_organization": true, | 65 | "is_organization": true, | ||
66 | "name": "dynamic-macroecology", | 66 | "name": "dynamic-macroecology", | ||
67 | "state": "active", | 67 | "state": "active", | ||
68 | "title": "Dynamic Macroecology", | 68 | "title": "Dynamic Macroecology", | ||
69 | "type": "organization" | 69 | "type": "organization" | ||
70 | }, | 70 | }, | ||
71 | "owner_org": "8bdea9a0-ea8c-424f-8c27-a4a1f0c55f02", | 71 | "owner_org": "8bdea9a0-ea8c-424f-8c27-a4a1f0c55f02", | ||
72 | "private": false, | 72 | "private": false, | ||
73 | "publication": | 73 | "publication": | ||
74 | "{\"publisher\":\"EnviDat\",\"publication_year\":\"2024\"}", | 74 | "{\"publisher\":\"EnviDat\",\"publication_year\":\"2024\"}", | ||
75 | "publication_state": "published", | 75 | "publication_state": "published", | ||
76 | "related_datasets": | 76 | "related_datasets": | ||
77 | r-the-treemig-framework-v1-for-easy-simulation-of-spatio-temporal-\n", | 77 | r-the-treemig-framework-v1-for-easy-simulation-of-spatio-temporal-\n", | ||
78 | "related_publications": | 78 | "related_publications": | ||
79 | A23775\n\nhttps://www.dora.lib4ri.ch/wsl/islandora/object/wsl%3A6049", | 79 | A23775\n\nhttps://www.dora.lib4ri.ch/wsl/islandora/object/wsl%3A6049", | ||
80 | "relationships_as_object": [], | 80 | "relationships_as_object": [], | ||
81 | "relationships_as_subject": [], | 81 | "relationships_as_subject": [], | ||
82 | "resource_type": "dataset", | 82 | "resource_type": "dataset", | ||
83 | "resource_type_general": "dataset", | 83 | "resource_type_general": "dataset", | ||
84 | "resources": [ | 84 | "resources": [ | ||
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88 | "created": "2024-08-08T14:12:56.721099", | 88 | "created": "2024-08-08T14:12:56.721099", | ||
89 | "description": "R-script to install the TreeMig framework and | 89 | "description": "R-script to install the TreeMig framework and | ||
90 | start the graphical user interface", | 90 | start the graphical user interface", | ||
91 | "doi": "", | 91 | "doi": "", | ||
92 | "format": "R", | 92 | "format": "R", | ||
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145 | "created": "2024-10-16T10:35:37.634128", | 145 | "created": "2024-10-16T10:35:37.634128", | ||
146 | "description": "1) Simulation environment | 146 | "description": "1) Simulation environment | ||
147 | TMEnvironmentExampleApplications for the simulation of the case study | 147 | TMEnvironmentExampleApplications for the simulation of the case study | ||
148 | applications. It contains a) simulation settings (folder C), b) | 148 | applications. It contains a) simulation settings (folder C), b) | ||
149 | species parameters (folder P), c) folders S, R and P for the state | 149 | species parameters (folder P), c) folders S, R and P for the state | ||
150 | files and results and plots to be produced, and the binaries of the | 150 | files and results and plots to be produced, and the binaries of the | ||
151 | TreeMig model.\n2) Input data for Switzerland in TMInputData (Climate, | 151 | TreeMig model.\n2) Input data for Switzerland in TMInputData (Climate, | ||
152 | soil, land cover, DEM)\n3) Several R scripts (folder Scripts) to run | 152 | soil, land cover, DEM)\n3) Several R scripts (folder Scripts) to run | ||
153 | and plot the simulations directly from R without having to use the | 153 | and plot the simulations directly from R without having to use the | ||
154 | graphical user interface.\nFor learning how to use TreeMig we | 154 | graphical user interface.\nFor learning how to use TreeMig we | ||
155 | recommend the starter kit | 155 | recommend the starter kit | ||
156 | https://www.doi.org/10.16904/envidat.533.\n", | 156 | https://www.doi.org/10.16904/envidat.533.\n", | ||
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202 | "url_type": "upload" | 203 | "url_type": "upload" | ||
203 | } | 204 | } | ||
204 | ], | 205 | ], | ||
205 | "spatial": | 206 | "spatial": | ||
206 | cations-demonstrating-the-use-and-potential-of-the-treemig-frame\"}}", | 207 | cations-demonstrating-the-use-and-potential-of-the-treemig-frame\"}}", | ||
207 | "state": "active", | 208 | "state": "active", | ||
208 | "subtitle": "", | 209 | "subtitle": "", | ||
209 | "tags": [ | 210 | "tags": [ | ||
210 | { | 211 | { | ||
211 | "display_name": "BIOCLIMATIC VARIABLES", | 212 | "display_name": "BIOCLIMATIC VARIABLES", | ||
212 | "id": "bd4ddaeb-49e0-4172-8432-025adeb042ec", | 213 | "id": "bd4ddaeb-49e0-4172-8432-025adeb042ec", | ||
213 | "name": "BIOCLIMATIC VARIABLES", | 214 | "name": "BIOCLIMATIC VARIABLES", | ||
214 | "state": "active", | 215 | "state": "active", | ||
215 | "vocabulary_id": null | 216 | "vocabulary_id": null | ||
216 | }, | 217 | }, | ||
217 | { | 218 | { | ||
218 | "display_name": "CLIMATE CHANGE", | 219 | "display_name": "CLIMATE CHANGE", | ||
219 | "id": "7586fd99-56bd-4c44-ace2-14d87ec1dd9b", | 220 | "id": "7586fd99-56bd-4c44-ace2-14d87ec1dd9b", | ||
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221 | "state": "active", | 222 | "state": "active", | ||
222 | "vocabulary_id": null | 223 | "vocabulary_id": null | ||
223 | }, | 224 | }, | ||
224 | { | 225 | { | ||
225 | "display_name": "EXAMPLE APPLICATIONS", | 226 | "display_name": "EXAMPLE APPLICATIONS", | ||
226 | "id": "f0114141-8f20-474f-84fa-7fe9e48aeda3", | 227 | "id": "f0114141-8f20-474f-84fa-7fe9e48aeda3", | ||
227 | "name": "EXAMPLE APPLICATIONS", | 228 | "name": "EXAMPLE APPLICATIONS", | ||
228 | "state": "active", | 229 | "state": "active", | ||
229 | "vocabulary_id": null | 230 | "vocabulary_id": null | ||
230 | }, | 231 | }, | ||
231 | { | 232 | { | ||
232 | "display_name": "FOREST", | 233 | "display_name": "FOREST", | ||
233 | "id": "90cd0d8f-8df0-4b78-ac11-6e38c2a22106", | 234 | "id": "90cd0d8f-8df0-4b78-ac11-6e38c2a22106", | ||
234 | "name": "FOREST", | 235 | "name": "FOREST", | ||
235 | "state": "active", | 236 | "state": "active", | ||
236 | "vocabulary_id": null | 237 | "vocabulary_id": null | ||
237 | }, | 238 | }, | ||
238 | { | 239 | { | ||
239 | "display_name": "FOREST DYNAMICS", | 240 | "display_name": "FOREST DYNAMICS", | ||
240 | "id": "84957a0d-7cb0-4e32-8633-f8c2e9b2a10f", | 241 | "id": "84957a0d-7cb0-4e32-8633-f8c2e9b2a10f", | ||
241 | "name": "FOREST DYNAMICS", | 242 | "name": "FOREST DYNAMICS", | ||
242 | "state": "active", | 243 | "state": "active", | ||
243 | "vocabulary_id": null | 244 | "vocabulary_id": null | ||
244 | }, | 245 | }, | ||
245 | { | 246 | { | ||
246 | "display_name": "FOREST MANAGEMENT", | 247 | "display_name": "FOREST MANAGEMENT", | ||
247 | "id": "d4404f05-ef28-4de6-b269-17713089be84", | 248 | "id": "d4404f05-ef28-4de6-b269-17713089be84", | ||
248 | "name": "FOREST MANAGEMENT", | 249 | "name": "FOREST MANAGEMENT", | ||
249 | "state": "active", | 250 | "state": "active", | ||
250 | "vocabulary_id": null | 251 | "vocabulary_id": null | ||
251 | }, | 252 | }, | ||
252 | { | 253 | { | ||
253 | "display_name": "LAND USE", | 254 | "display_name": "LAND USE", | ||
254 | "id": "4fce8a86-0614-4758-863c-9abc3b68b715", | 255 | "id": "4fce8a86-0614-4758-863c-9abc3b68b715", | ||
255 | "name": "LAND USE", | 256 | "name": "LAND USE", | ||
256 | "state": "active", | 257 | "state": "active", | ||
257 | "vocabulary_id": null | 258 | "vocabulary_id": null | ||
258 | }, | 259 | }, | ||
259 | { | 260 | { | ||
260 | "display_name": "R PACKAGE", | 261 | "display_name": "R PACKAGE", | ||
261 | "id": "3ba3a618-38b0-4788-b795-9836b692b3b3", | 262 | "id": "3ba3a618-38b0-4788-b795-9836b692b3b3", | ||
262 | "name": "R PACKAGE", | 263 | "name": "R PACKAGE", | ||
263 | "state": "active", | 264 | "state": "active", | ||
264 | "vocabulary_id": null | 265 | "vocabulary_id": null | ||
265 | }, | 266 | }, | ||
266 | { | 267 | { | ||
267 | "display_name": "SPATIAL MODELLING", | 268 | "display_name": "SPATIAL MODELLING", | ||
268 | "id": "feb98f97-0e99-4f06-85b0-fe8e5b1c9b9b", | 269 | "id": "feb98f97-0e99-4f06-85b0-fe8e5b1c9b9b", | ||
269 | "name": "SPATIAL MODELLING", | 270 | "name": "SPATIAL MODELLING", | ||
270 | "state": "active", | 271 | "state": "active", | ||
271 | "vocabulary_id": null | 272 | "vocabulary_id": null | ||
272 | }, | 273 | }, | ||
273 | { | 274 | { | ||
274 | "display_name": "SPECIES MIGRATION", | 275 | "display_name": "SPECIES MIGRATION", | ||
275 | "id": "eb823eb5-8de6-435e-8531-a7a27c505418", | 276 | "id": "eb823eb5-8de6-435e-8531-a7a27c505418", | ||
276 | "name": "SPECIES MIGRATION", | 277 | "name": "SPECIES MIGRATION", | ||
277 | "state": "active", | 278 | "state": "active", | ||
278 | "vocabulary_id": null | 279 | "vocabulary_id": null | ||
279 | }, | 280 | }, | ||
280 | { | 281 | { | ||
281 | "display_name": "TREEMIG", | 282 | "display_name": "TREEMIG", | ||
282 | "id": "bd8ace98-a206-4aea-9e29-c75b349287c1", | 283 | "id": "bd8ace98-a206-4aea-9e29-c75b349287c1", | ||
283 | "name": "TREEMIG", | 284 | "name": "TREEMIG", | ||
284 | "state": "active", | 285 | "state": "active", | ||
285 | "vocabulary_id": null | 286 | "vocabulary_id": null | ||
286 | } | 287 | } | ||
287 | ], | 288 | ], | ||
288 | "title": "Case study applications demonstrating the use and | 289 | "title": "Case study applications demonstrating the use and | ||
289 | potential of the TreeMig framework v1", | 290 | potential of the TreeMig framework v1", | ||
290 | "type": "dataset", | 291 | "type": "dataset", | ||
291 | "url": null | 292 | "url": null | ||
292 | } | 293 | } |