Changes
On September 15, 2021 at 12:10:33 PM UTC, Alexander Skeels:
-
No fields were updated. See the metadata diff for more details.
f | 1 | { | f | 1 | { |
2 | "author": "[{\"affiliation\": \"German Centre for Integrative | 2 | "author": "[{\"affiliation\": \"German Centre for Integrative | ||
3 | Biodiversity Research Halle\\u2013Jena\\u2013Leipzig\", | 3 | Biodiversity Research Halle\\u2013Jena\\u2013Leipzig\", | ||
4 | \"affiliation_02\": \"ETH Zurich\", \"affiliation_03\": \"\", | 4 | \"affiliation_02\": \"ETH Zurich\", \"affiliation_03\": \"\", | ||
5 | \"data_credit\": [\"collection\", \"validation\", \"curation\", | 5 | \"data_credit\": [\"collection\", \"validation\", \"curation\", | ||
6 | \"software\", \"publication\"], \"email\": \"oskar@hagen.bio\", | 6 | \"software\", \"publication\"], \"email\": \"oskar@hagen.bio\", | ||
7 | \"given_name\": \"Oskar\", \"identifier\": \"0000-0002-7931-6571\", | 7 | \"given_name\": \"Oskar\", \"identifier\": \"0000-0002-7931-6571\", | ||
8 | \"name\": \"Hagen\"}, {\"affiliation\": \"Swiss Federal Research | 8 | \"name\": \"Hagen\"}, {\"affiliation\": \"Swiss Federal Research | ||
9 | Institute for Forest, Snow and Landscape (WSL)\", \"affiliation_02\": | 9 | Institute for Forest, Snow and Landscape (WSL)\", \"affiliation_02\": | ||
10 | \"ETH Zurich\", \"affiliation_03\": \"\", \"data_credit\": | 10 | \"ETH Zurich\", \"affiliation_03\": \"\", \"data_credit\": | ||
11 | [\"collection\", \"validation\", \"curation\", \"software\", | 11 | [\"collection\", \"validation\", \"curation\", \"software\", | ||
12 | \"publication\"], \"email\": \"alexander.skeels@usys.ethz.ch\", | 12 | \"publication\"], \"email\": \"alexander.skeels@usys.ethz.ch\", | ||
13 | \"given_name\": \"Alexander\", \"identifier\": \"\", \"name\": | 13 | \"given_name\": \"Alexander\", \"identifier\": \"\", \"name\": | ||
14 | \"Skeels\"}, {\"affiliation\": \"German Centre for Integrative | 14 | \"Skeels\"}, {\"affiliation\": \"German Centre for Integrative | ||
15 | Biodiversity Research Halle\\u2013Jena\\u2013Leipzig\", | 15 | Biodiversity Research Halle\\u2013Jena\\u2013Leipzig\", | ||
16 | \"affiliation_02\": \"\", \"affiliation_03\": \"\", \"data_credit\": | 16 | \"affiliation_02\": \"\", \"affiliation_03\": \"\", \"data_credit\": | ||
17 | [\"collection\", \"publication\"], \"email\": | 17 | [\"collection\", \"publication\"], \"email\": | ||
18 | \"renske.onstein@idiv.de\", \"given_name\": \"Renske\", | 18 | \"renske.onstein@idiv.de\", \"given_name\": \"Renske\", | ||
19 | \"identifier\": \"0000-0002-2295-3510\", \"name\": \"Onstein\"}, | 19 | \"identifier\": \"0000-0002-2295-3510\", \"name\": \"Onstein\"}, | ||
20 | {\"affiliation\": \"Department of Ecology and Evolutionary Biology, | 20 | {\"affiliation\": \"Department of Ecology and Evolutionary Biology, | ||
21 | Yale University\", \"affiliation_02\": \"\", \"affiliation_03\": \"\", | 21 | Yale University\", \"affiliation_02\": \"\", \"affiliation_03\": \"\", | ||
22 | \"data_credit\": [\"collection\", \"validation\", \"publication\"], | 22 | \"data_credit\": [\"collection\", \"validation\", \"publication\"], | ||
23 | \"email\": \"walter.jetz@yale.edu\", \"given_name\": \"Walter\", | 23 | \"email\": \"walter.jetz@yale.edu\", \"given_name\": \"Walter\", | ||
24 | \"identifier\": \"0000-0002-1971-7277\", \"name\": \"Jetz\"}, | 24 | \"identifier\": \"0000-0002-1971-7277\", \"name\": \"Jetz\"}, | ||
25 | {\"affiliation\": \"ETH Zurich\", \"affiliation_02\": \"Swiss Federal | 25 | {\"affiliation\": \"ETH Zurich\", \"affiliation_02\": \"Swiss Federal | ||
26 | Research Institute for Forest, Snow and Landscape (WSL)\", | 26 | Research Institute for Forest, Snow and Landscape (WSL)\", | ||
27 | \"affiliation_03\": \"\", \"data_credit\": [\"collection\", | 27 | \"affiliation_03\": \"\", \"data_credit\": [\"collection\", | ||
28 | \"validation\", \"curation\", \"software\", \"publication\", | 28 | \"validation\", \"curation\", \"software\", \"publication\", | ||
29 | \"supervision\"], \"email\": \"loic.pellissier@usys.ethz.ch\", | 29 | \"supervision\"], \"email\": \"loic.pellissier@usys.ethz.ch\", | ||
30 | \"given_name\": \"Loic\", \"identifier\": \"\", \"name\": | 30 | \"given_name\": \"Loic\", \"identifier\": \"\", \"name\": | ||
31 | \"Pellissier\"}]", | 31 | \"Pellissier\"}]", | ||
32 | "author_email": null, | 32 | "author_email": null, | ||
33 | "creator_user_id": "93fd6aa4-4bae-4c26-9561-c54eb9142d42", | 33 | "creator_user_id": "93fd6aa4-4bae-4c26-9561-c54eb9142d42", | ||
34 | "date": "[{\"date\": \"2020-04-15\", \"date_type\": \"collected\", | 34 | "date": "[{\"date\": \"2020-04-15\", \"date_type\": \"collected\", | ||
35 | \"end_date\": \"2021-09-15\"}]", | 35 | \"end_date\": \"2021-09-15\"}]", | ||
36 | "doi": "", | 36 | "doi": "", | ||
37 | "funding": "[{\"grant_number\": \"310030-188550\", \"institution\": | 37 | "funding": "[{\"grant_number\": \"310030-188550\", \"institution\": | ||
38 | \"Schweizerischer Nationalfonds zur F\u00f6rderung der | 38 | \"Schweizerischer Nationalfonds zur F\u00f6rderung der | ||
39 | Wissenschaftlichen Forschung\", \"institution_url\": \"\"}]", | 39 | Wissenschaftlichen Forschung\", \"institution_url\": \"\"}]", | ||
40 | "groups": [], | 40 | "groups": [], | ||
41 | "id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | 41 | "id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | ||
42 | "isopen": false, | 42 | "isopen": false, | ||
43 | "language": "en", | 43 | "language": "en", | ||
44 | "license_id": "wsl-data", | 44 | "license_id": "wsl-data", | ||
45 | "license_title": "WSL Data Policy", | 45 | "license_title": "WSL Data Policy", | ||
46 | "license_url": | 46 | "license_url": | ||
47 | ps://www.wsl.ch/en/about-wsl/programmes-and-initiatives/envidat.html", | 47 | ps://www.wsl.ch/en/about-wsl/programmes-and-initiatives/envidat.html", | ||
48 | "maintainer": "{\"affiliation\": \"WSL / ETH\", \"email\": | 48 | "maintainer": "{\"affiliation\": \"WSL / ETH\", \"email\": | ||
49 | \"loic.pellissier@usys.ethz.ch\", \"given_name\": \"Loic\", | 49 | \"loic.pellissier@usys.ethz.ch\", \"given_name\": \"Loic\", | ||
50 | \"identifier\": \"\", \"name\": \"Pellissier\"}", | 50 | \"identifier\": \"\", \"name\": \"Pellissier\"}", | ||
51 | "maintainer_email": null, | 51 | "maintainer_email": null, | ||
52 | "metadata_created": "2021-09-15T11:44:16.660831", | 52 | "metadata_created": "2021-09-15T11:44:16.660831", | ||
n | 53 | "metadata_modified": "2021-09-15T12:09:53.628394", | n | 53 | "metadata_modified": "2021-09-15T12:10:33.355501", |
54 | "name": "data-from-hagen_skeels_etal_2021_pnas", | 54 | "name": "data-from-hagen_skeels_etal_2021_pnas", | ||
55 | "notes": "Datasets and R scripts | 55 | "notes": "Datasets and R scripts | ||
56 | \r\n\r\n~~~~~Datasets\r\n\r\nDataset_S1.csv includes species diversity | 56 | \r\n\r\n~~~~~Datasets\r\n\r\nDataset_S1.csv includes species diversity | ||
57 | counts for 237 clades in tropical moist forests (TMF) in the | 57 | counts for 237 clades in tropical moist forests (TMF) in the | ||
58 | Neotropics (NeotropicalTMF), Indomalaya (IndomalayanTMF), Afrotropics | 58 | Neotropics (NeotropicalTMF), Indomalaya (IndomalayanTMF), Afrotropics | ||
59 | (AfrotropicalTMF), All three TMF regions together (AllTMF), all | 59 | (AfrotropicalTMF), All three TMF regions together (AllTMF), all | ||
60 | non-TMF regions (NonTMF), and in total (Total). As well as whether the | 60 | non-TMF regions (NonTMF), and in total (Total). As well as whether the | ||
61 | clade is pantropical (Pantropical_clade) and shows the pantropical | 61 | clade is pantropical (Pantropical_clade) and shows the pantropical | ||
62 | diversity disparity (PDD_clade). \r\n\r\nDataset_S2.csv: environmental | 62 | diversity disparity (PDD_clade). \r\n\r\nDataset_S2.csv: environmental | ||
63 | and species richness data. Longitude (x), latitude (y), potential | 63 | and species richness data. Longitude (x), latitude (y), potential | ||
64 | evapotranspiration (PET), mean annual temperature (MAT), mean annual | 64 | evapotranspiration (PET), mean annual temperature (MAT), mean annual | ||
65 | precipitation), amphibian, bird, mammal, and reptile species richness, | 65 | precipitation), amphibian, bird, mammal, and reptile species richness, | ||
66 | PC1 and PC2 of environmental PCA and the region. Environmental data | 66 | PC1 and PC2 of environmental PCA and the region. Environmental data | ||
67 | (from CHELSA and ENVIREM) and species richness summarised from | 67 | (from CHELSA and ENVIREM) and species richness summarised from | ||
68 | published data (vertLife, MOL, IUCN, GARD).\r\n\r\nDataset_S3.csv: - | 68 | published data (vertLife, MOL, IUCN, GARD).\r\n\r\nDataset_S3.csv: - | ||
69 | Paleoenvironmental reconstructions (details in the associated SI | 69 | Paleoenvironmental reconstructions (details in the associated SI | ||
70 | appendix) including latitude (y), longitude (x), and temperature data | 70 | appendix) including latitude (y), longitude (x), and temperature data | ||
71 | across 200 myrs at 170 kyr intervals.\r\n\r\nDataset_S4.csv: | 71 | across 200 myrs at 170 kyr intervals.\r\n\r\nDataset_S4.csv: | ||
72 | simulation model parameters and diversity summary statistics. | 72 | simulation model parameters and diversity summary statistics. | ||
73 | Including rate of temperature niche evolution (Tev), temperature niche | 73 | Including rate of temperature niche evolution (Tev), temperature niche | ||
74 | width (TW), divergence threshold (S), Dispersal probability | 74 | width (TW), divergence threshold (S), Dispersal probability | ||
75 | distribution shape (WeibullShape) and information on number of extinct | 75 | distribution shape (WeibullShape) and information on number of extinct | ||
76 | species, number of extant species, total species, Spearman correlation | 76 | species, number of extant species, total species, Spearman correlation | ||
77 | coefficient between absolute latitude and species richness | 77 | coefficient between absolute latitude and species richness | ||
78 | (latitude_richness_cor), and diversity in the Neotropics, Indomalaya, | 78 | (latitude_richness_cor), and diversity in the Neotropics, Indomalaya, | ||
79 | Afrotropics. Also, whether the simulation generated pantropical | 79 | Afrotropics. Also, whether the simulation generated pantropical | ||
80 | distribution of species (pantropicality_index), or the pantropical | 80 | distribution of species (pantropicality_index), or the pantropical | ||
81 | diversity disparity (PDD_index). Finally what time step the simulation | 81 | diversity disparity (PDD_index). Finally what time step the simulation | ||
82 | exited at (0 for complete simulations).\r\n\r\nDataset_S5.csv: Net | 82 | exited at (0 for complete simulations).\r\n\r\nDataset_S5.csv: Net | ||
83 | relatedness index (NRI) in three tropical moist forest regions and | 83 | relatedness index (NRI) in three tropical moist forest regions and | ||
84 | associated p-values for pantropically distributed | 84 | associated p-values for pantropically distributed | ||
85 | taxa.\r\n\r\n~~~~~Scripts\r\n\r\nGen3sis_config_creator.R and | 85 | taxa.\r\n\r\n~~~~~Scripts\r\n\r\nGen3sis_config_creator.R and | ||
86 | Gen3sis_config_template.R scripts generate the configurations files to | 86 | Gen3sis_config_template.R scripts generate the configurations files to | ||
87 | run the simulation experiment.\r\n\r\nGLS.R R script to replicate the | 87 | run the simulation experiment.\r\n\r\nGLS.R R script to replicate the | ||
88 | linear modelling analyses.\r\n\r\n", | 88 | linear modelling analyses.\r\n\r\n", | ||
89 | "num_resources": 10, | 89 | "num_resources": 10, | ||
90 | "num_tags": 5, | 90 | "num_tags": 5, | ||
91 | "organization": { | 91 | "organization": { | ||
92 | "approval_status": "approved", | 92 | "approval_status": "approved", | ||
93 | "created": "2018-12-01T11:42:44.590217", | 93 | "created": "2018-12-01T11:42:44.590217", | ||
94 | "description": "Our laboratory aims at understanding and | 94 | "description": "Our laboratory aims at understanding and | ||
95 | forecasting the response of biodiversity to landscape changes. We | 95 | forecasting the response of biodiversity to landscape changes. We | ||
96 | investigate the historical responses of species to past changes such | 96 | investigate the historical responses of species to past changes such | ||
97 | as plate tectonics or the glaciations of the Quaternary and | 97 | as plate tectonics or the glaciations of the Quaternary and | ||
98 | contemporary responses to ongoing global changes. We develop spatial | 98 | contemporary responses to ongoing global changes. We develop spatial | ||
99 | mechanistic models of biodiversity that account for processes such as | 99 | mechanistic models of biodiversity that account for processes such as | ||
100 | dispersal and biotic interactions.", | 100 | dispersal and biotic interactions.", | ||
101 | "id": "3b0fde83-e15c-4f8b-a451-9778f5309a84", | 101 | "id": "3b0fde83-e15c-4f8b-a451-9778f5309a84", | ||
102 | "image_url": | 102 | "image_url": | ||
103 | ww.ites.ethz.ch/_jcr_content/orgLogo.imageformat.logo.1518520524.jpg", | 103 | ww.ites.ethz.ch/_jcr_content/orgLogo.imageformat.logo.1518520524.jpg", | ||
104 | "is_organization": true, | 104 | "is_organization": true, | ||
105 | "name": "landscape-ecology", | 105 | "name": "landscape-ecology", | ||
106 | "state": "active", | 106 | "state": "active", | ||
107 | "title": "Landscape Ecology", | 107 | "title": "Landscape Ecology", | ||
108 | "type": "organization" | 108 | "type": "organization" | ||
109 | }, | 109 | }, | ||
110 | "owner_org": "3b0fde83-e15c-4f8b-a451-9778f5309a84", | 110 | "owner_org": "3b0fde83-e15c-4f8b-a451-9778f5309a84", | ||
111 | "private": false, | 111 | "private": false, | ||
112 | "publication": "{\"publication_year\": \"2021\", \"publisher\": | 112 | "publication": "{\"publication_year\": \"2021\", \"publisher\": | ||
113 | \"EnviDat\"}", | 113 | \"EnviDat\"}", | ||
114 | "publication_state": "", | 114 | "publication_state": "", | ||
115 | "related_datasets": "", | 115 | "related_datasets": "", | ||
116 | "related_publications": "", | 116 | "related_publications": "", | ||
117 | "relationships_as_object": [], | 117 | "relationships_as_object": [], | ||
118 | "relationships_as_subject": [], | 118 | "relationships_as_subject": [], | ||
119 | "resource_type": "dataset", | 119 | "resource_type": "dataset", | ||
120 | "resource_type_general": "dataset", | 120 | "resource_type_general": "dataset", | ||
121 | "resources": [ | 121 | "resources": [ | ||
122 | { | 122 | { | ||
123 | "cache_last_updated": null, | 123 | "cache_last_updated": null, | ||
124 | "cache_url": null, | 124 | "cache_url": null, | ||
n | 125 | "created": "2021-09-15T11:51:54.396594", | n | 125 | "created": "2021-09-15T12:09:53.660447", |
126 | "description": "Dataset_S1.csv includes species diversity counts | 126 | "description": "Dataset_S1.csv includes species diversity counts | ||
127 | for 237 clades in tropical moist forests (TMF) in the Neotropics | 127 | for 237 clades in tropical moist forests (TMF) in the Neotropics | ||
128 | (NeotropicalTMF), Indomalaya (IndomalayanTMF), Afrotropics | 128 | (NeotropicalTMF), Indomalaya (IndomalayanTMF), Afrotropics | ||
129 | (AfrotropicalTMF), All three TMF regions together (AllTMF), all | 129 | (AfrotropicalTMF), All three TMF regions together (AllTMF), all | ||
130 | non-TMF regions (NonTMF), and in total (Total). As well as whether the | 130 | non-TMF regions (NonTMF), and in total (Total). As well as whether the | ||
131 | clade is pantropical (Pantropical_clade) and shows the pantropical | 131 | clade is pantropical (Pantropical_clade) and shows the pantropical | ||
132 | diversity disparity (PDD_clade). ", | 132 | diversity disparity (PDD_clade). ", | ||
133 | "doi": "", | 133 | "doi": "", | ||
n | n | 134 | "format": ".csv", | ||
135 | "hash": "", | ||||
136 | "id": "b0817120-8f1f-4d93-af06-524583a82acd", | ||||
137 | "last_modified": null, | ||||
138 | "metadata_modified": "2021-09-15T12:09:53.635265", | ||||
139 | "mimetype": null, | ||||
140 | "mimetype_inner": null, | ||||
141 | "name": "Dataset S1", | ||||
142 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | ||||
143 | "position": 0, | ||||
144 | "publication_state": "", | ||||
145 | "resource_size": "{\"size_value\": \"\", \"size_units\": | ||||
146 | \"kb\"}", | ||||
147 | "resource_type": null, | ||||
148 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | ||||
149 | \"shared_secret\": \"\"}", | ||||
150 | "size": 8409, | ||||
151 | "state": "active", | ||||
152 | "url": | ||||
153 | esource/b0817120-8f1f-4d93-af06-524583a82acd/download/dataset_s1.csv", | ||||
154 | "url_type": "upload" | ||||
155 | }, | ||||
156 | { | ||||
157 | "cache_last_updated": null, | ||||
158 | "cache_url": null, | ||||
159 | "created": "2021-09-15T12:04:28.996114", | ||||
160 | "description": "Dataset_S2.csv: environmental and species | ||||
161 | richness data. Longitude (x), latitude (y), potential | ||||
162 | evapotranspiration (PET), mean annual temperature (MAT), mean annual | ||||
163 | precipitation), amphibian, bird, mammal, and reptile species richness, | ||||
164 | PC1 and PC2 of environmental PCA and the region. Environmental data | ||||
165 | (from CHELSA and ENVIREM) and species richness summarised from | ||||
166 | published data (vertLife, MOL, IUCN, GARD).", | ||||
167 | "doi": "", | ||||
168 | "format": ".csv", | ||||
169 | "hash": "", | ||||
170 | "id": "7b01096c-5f9a-4d98-8129-125b9a749a27", | ||||
171 | "last_modified": null, | ||||
172 | "metadata_modified": "2021-09-15T12:04:28.975274", | ||||
173 | "mimetype": null, | ||||
174 | "mimetype_inner": null, | ||||
175 | "name": "Dataset S2", | ||||
176 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | ||||
177 | "position": 1, | ||||
178 | "publication_state": "", | ||||
179 | "resource_size": "{\"size_value\": \"\", \"size_units\": | ||||
180 | \"kb\"}", | ||||
181 | "resource_type": null, | ||||
182 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | ||||
183 | \"shared_secret\": \"\"}", | ||||
184 | "size": 207900, | ||||
185 | "state": "active", | ||||
186 | "url": | ||||
187 | esource/7b01096c-5f9a-4d98-8129-125b9a749a27/download/dataset_s2.csv", | ||||
188 | "url_type": "upload" | ||||
189 | }, | ||||
190 | { | ||||
191 | "cache_last_updated": null, | ||||
192 | "cache_url": null, | ||||
193 | "created": "2021-09-15T12:05:05.340288", | ||||
194 | "description": "Dataset_S3.csv: - Paleoenvironmental | ||||
195 | reconstructions (details in the associated SI appendix) including | ||||
196 | latitude (y), longitude (x), and temperature data across 200 myrs at | ||||
197 | 170 kyr intervals.", | ||||
198 | "doi": "", | ||||
199 | "format": ".csv", | ||||
200 | "hash": "", | ||||
201 | "id": "eb9e15a4-70c8-43b9-8ed1-8ae476c66e97", | ||||
202 | "last_modified": null, | ||||
203 | "metadata_modified": "2021-09-15T12:05:05.319503", | ||||
204 | "mimetype": null, | ||||
205 | "mimetype_inner": null, | ||||
206 | "name": "Dataset S3", | ||||
207 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | ||||
208 | "position": 2, | ||||
209 | "publication_state": "", | ||||
210 | "resource_size": "{\"size_value\": \"\", \"size_units\": | ||||
211 | \"kb\"}", | ||||
212 | "resource_type": null, | ||||
213 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | ||||
214 | \"shared_secret\": \"\"}", | ||||
215 | "size": 147810332, | ||||
216 | "state": "active", | ||||
217 | "url": | ||||
218 | esource/eb9e15a4-70c8-43b9-8ed1-8ae476c66e97/download/dataset_s3.csv", | ||||
219 | "url_type": "upload" | ||||
220 | }, | ||||
221 | { | ||||
222 | "cache_last_updated": null, | ||||
223 | "cache_url": null, | ||||
224 | "created": "2021-09-15T12:05:33.383648", | ||||
225 | "description": "Dataset_S4.csv: simulation model parameters and | ||||
226 | diversity summary statistics. Including rate of temperature niche | ||||
227 | evolution (Tev), temperature niche width (TW), divergence threshold | ||||
228 | (S), Dispersal probability distribution shape (WeibullShape) and | ||||
229 | information on number of extinct species, number of extant species, | ||||
230 | total species, Spearman correlation coefficient between absolute | ||||
231 | latitude and species richness (latitude_richness_cor), and diversity | ||||
232 | in the Neotropics, Indomalaya, Afrotropics. Also, whether the | ||||
233 | simulation generated pantropical distribution of species | ||||
234 | (pantropicality_index), or the pantropical diversity disparity | ||||
235 | (PDD_index). Finally what time step the simulation exited at (0 for | ||||
236 | complete simulations).", | ||||
237 | "doi": "", | ||||
238 | "format": ".csv", | ||||
239 | "hash": "", | ||||
240 | "id": "39396f2a-8074-42eb-a846-e05edee2c513", | ||||
241 | "last_modified": null, | ||||
242 | "metadata_modified": "2021-09-15T12:05:33.361264", | ||||
243 | "mimetype": null, | ||||
244 | "mimetype_inner": null, | ||||
245 | "name": "Dataset S4", | ||||
246 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | ||||
247 | "position": 3, | ||||
248 | "publication_state": "", | ||||
249 | "resource_size": "{\"size_value\": \"\", \"size_units\": | ||||
250 | \"kb\"}", | ||||
251 | "resource_type": null, | ||||
252 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | ||||
253 | \"shared_secret\": \"\"}", | ||||
254 | "size": 46904, | ||||
255 | "state": "active", | ||||
256 | "url": | ||||
257 | esource/39396f2a-8074-42eb-a846-e05edee2c513/download/dataset_s4.csv", | ||||
258 | "url_type": "upload" | ||||
259 | }, | ||||
260 | { | ||||
261 | "cache_last_updated": null, | ||||
262 | "cache_url": null, | ||||
263 | "created": "2021-09-15T12:06:02.368837", | ||||
264 | "description": "Dataset_S5.csv: Net relatedness index (NRI) in | ||||
265 | three tropical moist forest regions and associated p-values for | ||||
266 | pantropically distributed taxa.", | ||||
267 | "doi": "", | ||||
268 | "format": ".csv", | ||||
269 | "hash": "", | ||||
270 | "id": "41abc042-7c25-424d-bed2-196912d6e7ab", | ||||
271 | "last_modified": null, | ||||
272 | "metadata_modified": "2021-09-15T12:06:02.347186", | ||||
273 | "mimetype": null, | ||||
274 | "mimetype_inner": null, | ||||
275 | "name": "Dataset S5", | ||||
276 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | ||||
277 | "position": 4, | ||||
278 | "publication_state": "", | ||||
279 | "resource_size": "{\"size_value\": \"\", \"size_units\": | ||||
280 | \"kb\"}", | ||||
281 | "resource_type": null, | ||||
282 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | ||||
283 | \"shared_secret\": \"\"}", | ||||
284 | "size": 1652, | ||||
285 | "state": "active", | ||||
286 | "url": | ||||
287 | esource/41abc042-7c25-424d-bed2-196912d6e7ab/download/dataset_s5.csv", | ||||
288 | "url_type": "upload" | ||||
289 | }, | ||||
290 | { | ||||
291 | "cache_last_updated": null, | ||||
292 | "cache_url": null, | ||||
293 | "created": "2021-09-15T11:53:49.193691", | ||||
294 | "description": "GLS.R R script to replicate the linear modeling | ||||
295 | analyses.", | ||||
296 | "doi": "", | ||||
134 | "format": "", | 297 | "format": "", | ||
135 | "hash": "", | 298 | "hash": "", | ||
n | 136 | "id": "5e558880-f6fd-4ec6-ab35-e7d07180d690", | n | 299 | "id": "94e4eef9-a818-4893-a71a-eacf5b4ba867", |
137 | "last_modified": null, | 300 | "last_modified": null, | ||
n | 138 | "metadata_modified": "2021-09-15T12:01:41.711067", | n | 301 | "metadata_modified": "2021-09-15T11:53:49.167409", |
139 | "mimetype": null, | ||||
140 | "mimetype_inner": null, | 302 | "mimetype": null, | ||
141 | "name": "Dataset S1", | 303 | "mimetype_inner": null, | ||
304 | "name": "GLS script", | ||||
142 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | 305 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | ||
n | 143 | "position": 0, | n | 306 | "position": 5, |
144 | "publication_state": "", | 307 | "publication_state": "", | ||
145 | "resource_size": "{\"size_value\": \"\", \"size_units\": | 308 | "resource_size": "{\"size_value\": \"\", \"size_units\": | ||
146 | \"kb\"}", | 309 | \"kb\"}", | ||
147 | "resource_type": null, | 310 | "resource_type": null, | ||
148 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | 311 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | ||
149 | \"shared_secret\": \"\"}", | 312 | \"shared_secret\": \"\"}", | ||
n | 150 | "size": 8409, | n | 313 | "size": 8705, |
151 | "state": "active", | 314 | "state": "active", | ||
152 | "url": | 315 | "url": | ||
n | 153 | esource/5e558880-f6fd-4ec6-ab35-e7d07180d690/download/dataset_s1.csv", | n | 316 | fc875b9/resource/94e4eef9-a818-4893-a71a-eacf5b4ba867/download/gls.r", |
154 | "url_type": "upload" | 317 | "url_type": "upload" | ||
155 | }, | 318 | }, | ||
156 | { | 319 | { | ||
157 | "cache_last_updated": null, | 320 | "cache_last_updated": null, | ||
158 | "cache_url": null, | 321 | "cache_url": null, | ||
159 | "created": "2021-09-15T11:45:27.749059", | 322 | "created": "2021-09-15T11:45:27.749059", | ||
160 | "description": "Gen3sis_config_creator.R and | 323 | "description": "Gen3sis_config_creator.R and | ||
161 | Gen3sis_config_template.R scripts generate the configurations files to | 324 | Gen3sis_config_template.R scripts generate the configurations files to | ||
162 | run the simulation experiment.", | 325 | run the simulation experiment.", | ||
163 | "doi": "", | 326 | "doi": "", | ||
164 | "format": "R", | 327 | "format": "R", | ||
165 | "hash": "", | 328 | "hash": "", | ||
166 | "id": "a571cd80-2302-4fd8-aa60-2c3176654bb5", | 329 | "id": "a571cd80-2302-4fd8-aa60-2c3176654bb5", | ||
167 | "last_modified": null, | 330 | "last_modified": null, | ||
168 | "metadata_modified": "2021-09-15T11:45:27.723569", | 331 | "metadata_modified": "2021-09-15T11:45:27.723569", | ||
169 | "mimetype": null, | 332 | "mimetype": null, | ||
170 | "mimetype_inner": null, | 333 | "mimetype_inner": null, | ||
171 | "name": "Gen3sis config creator", | 334 | "name": "Gen3sis config creator", | ||
172 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | 335 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | ||
n | 173 | "position": 1, | n | 336 | "position": 6, |
174 | "publication_state": "", | 337 | "publication_state": "", | ||
175 | "resource_size": "{\"size_value\": \"\", \"size_units\": | 338 | "resource_size": "{\"size_value\": \"\", \"size_units\": | ||
176 | \"kb\"}", | 339 | \"kb\"}", | ||
177 | "resource_type": null, | 340 | "resource_type": null, | ||
178 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | 341 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | ||
179 | \"shared_secret\": \"\"}", | 342 | \"shared_secret\": \"\"}", | ||
180 | "size": 3070, | 343 | "size": 3070, | ||
181 | "state": "active", | 344 | "state": "active", | ||
182 | "url": | 345 | "url": | ||
183 | 71cd80-2302-4fd8-aa60-2c3176654bb5/download/gen3sis_config_creator.r", | 346 | 71cd80-2302-4fd8-aa60-2c3176654bb5/download/gen3sis_config_creator.r", | ||
184 | "url_type": "upload" | 347 | "url_type": "upload" | ||
185 | }, | 348 | }, | ||
186 | { | 349 | { | ||
187 | "cache_last_updated": null, | 350 | "cache_last_updated": null, | ||
188 | "cache_url": null, | 351 | "cache_url": null, | ||
189 | "created": "2021-09-15T11:53:08.187875", | 352 | "created": "2021-09-15T11:53:08.187875", | ||
190 | "description": "Gen3sis_config_creator.R and | 353 | "description": "Gen3sis_config_creator.R and | ||
191 | Gen3sis_config_template.R scripts generate the configurations files to | 354 | Gen3sis_config_template.R scripts generate the configurations files to | ||
192 | run the simulation experiment.", | 355 | run the simulation experiment.", | ||
193 | "doi": "", | 356 | "doi": "", | ||
194 | "format": "", | 357 | "format": "", | ||
195 | "hash": "", | 358 | "hash": "", | ||
196 | "id": "60c365f0-90a2-4001-9e46-24071dd08382", | 359 | "id": "60c365f0-90a2-4001-9e46-24071dd08382", | ||
197 | "last_modified": null, | 360 | "last_modified": null, | ||
198 | "metadata_modified": "2021-09-15T11:53:08.168593", | 361 | "metadata_modified": "2021-09-15T11:53:08.168593", | ||
199 | "mimetype": null, | 362 | "mimetype": null, | ||
200 | "mimetype_inner": null, | 363 | "mimetype_inner": null, | ||
201 | "name": "Gen3sis config template", | 364 | "name": "Gen3sis config template", | ||
202 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | 365 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | ||
n | 203 | "position": 2, | n | 366 | "position": 7, |
204 | "publication_state": "", | 367 | "publication_state": "", | ||
205 | "resource_size": "{\"size_value\": \"\", \"size_units\": | 368 | "resource_size": "{\"size_value\": \"\", \"size_units\": | ||
206 | \"kb\"}", | 369 | \"kb\"}", | ||
207 | "resource_type": null, | 370 | "resource_type": null, | ||
208 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | 371 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | ||
209 | \"shared_secret\": \"\"}", | 372 | \"shared_secret\": \"\"}", | ||
210 | "size": 6345, | 373 | "size": 6345, | ||
211 | "state": "active", | 374 | "state": "active", | ||
212 | "url": | 375 | "url": | ||
213 | 365f0-90a2-4001-9e46-24071dd08382/download/gen3sis_config_template.r", | 376 | 365f0-90a2-4001-9e46-24071dd08382/download/gen3sis_config_template.r", | ||
n | 214 | "url_type": "upload" | n | ||
215 | }, | ||||
216 | { | ||||
217 | "cache_last_updated": null, | ||||
218 | "cache_url": null, | ||||
219 | "created": "2021-09-15T11:53:49.193691", | ||||
220 | "description": "GLS.R R script to replicate the linear modeling | ||||
221 | analyses.", | ||||
222 | "doi": "", | ||||
223 | "format": "", | ||||
224 | "hash": "", | ||||
225 | "id": "94e4eef9-a818-4893-a71a-eacf5b4ba867", | ||||
226 | "last_modified": null, | ||||
227 | "metadata_modified": "2021-09-15T11:53:49.167409", | ||||
228 | "mimetype": null, | ||||
229 | "mimetype_inner": null, | ||||
230 | "name": "GLS script", | ||||
231 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | ||||
232 | "position": 3, | ||||
233 | "publication_state": "", | ||||
234 | "resource_size": "{\"size_value\": \"\", \"size_units\": | ||||
235 | \"kb\"}", | ||||
236 | "resource_type": null, | ||||
237 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | ||||
238 | \"shared_secret\": \"\"}", | ||||
239 | "size": 8705, | ||||
240 | "state": "active", | ||||
241 | "url": | ||||
242 | fc875b9/resource/94e4eef9-a818-4893-a71a-eacf5b4ba867/download/gls.r", | ||||
243 | "url_type": "upload" | 377 | "url_type": "upload" | ||
244 | }, | 378 | }, | ||
245 | { | 379 | { | ||
246 | "cache_last_updated": null, | 380 | "cache_last_updated": null, | ||
247 | "cache_url": null, | 381 | "cache_url": null, | ||
248 | "created": "2021-09-15T11:48:21.670609", | 382 | "created": "2021-09-15T11:48:21.670609", | ||
249 | "description": "Zip folder containing:\r\n\r\nDataset_S1.csv: | 383 | "description": "Zip folder containing:\r\n\r\nDataset_S1.csv: | ||
250 | includes species diversity counts for 237 clades in tropical moist | 384 | includes species diversity counts for 237 clades in tropical moist | ||
251 | forests (TMF) in the Neotropics (NeotropicalTMF), Indomalaya | 385 | forests (TMF) in the Neotropics (NeotropicalTMF), Indomalaya | ||
252 | (IndomalayanTMF), Afrotropics (AfrotropicalTMF), All three TMF regions | 386 | (IndomalayanTMF), Afrotropics (AfrotropicalTMF), All three TMF regions | ||
253 | together (AllTMF), all non-TMF regions (NonTMF), and in total (Total). | 387 | together (AllTMF), all non-TMF regions (NonTMF), and in total (Total). | ||
254 | As well as whether the clade is pantropical (Pantropical_clade) and | 388 | As well as whether the clade is pantropical (Pantropical_clade) and | ||
255 | shows the pantropical diversity disparity (PDD_clade). | 389 | shows the pantropical diversity disparity (PDD_clade). | ||
256 | \r\nDataset_S2.csv: environmental and species richness data. Longitude | 390 | \r\nDataset_S2.csv: environmental and species richness data. Longitude | ||
257 | (x), latitude (y), potential evapotranspiration (PET), mean annual | 391 | (x), latitude (y), potential evapotranspiration (PET), mean annual | ||
258 | temperature (MAT), mean annual precipitation), amphibian, bird, | 392 | temperature (MAT), mean annual precipitation), amphibian, bird, | ||
259 | mammal, and reptile species richness, PC1 and PC2 of environmental PCA | 393 | mammal, and reptile species richness, PC1 and PC2 of environmental PCA | ||
260 | and the region. Environmental data (from CHELSA and ENVIREM) and | 394 | and the region. Environmental data (from CHELSA and ENVIREM) and | ||
261 | species richness summarised from published data (vertLife, MOL, IUCN, | 395 | species richness summarised from published data (vertLife, MOL, IUCN, | ||
262 | GARD).\r\nDataset_S3.csv: - Paleoenvironmental reconstructions | 396 | GARD).\r\nDataset_S3.csv: - Paleoenvironmental reconstructions | ||
263 | (details in the associated SI appendix) including latitude (y), | 397 | (details in the associated SI appendix) including latitude (y), | ||
264 | longitude (x), and temperature data across 200 myrs at 170 kyr | 398 | longitude (x), and temperature data across 200 myrs at 170 kyr | ||
265 | intervals.\r\nDataset_S4.csv: simulation model parameters and | 399 | intervals.\r\nDataset_S4.csv: simulation model parameters and | ||
266 | diversity summary statistics. Including rate of temperature niche | 400 | diversity summary statistics. Including rate of temperature niche | ||
267 | evolution (Tev), temperature niche width (TW), divergence threshold | 401 | evolution (Tev), temperature niche width (TW), divergence threshold | ||
268 | (S), Dispersal probability distribution shape (WeibullShape) and | 402 | (S), Dispersal probability distribution shape (WeibullShape) and | ||
269 | information on number of extinct species, number of extant species, | 403 | information on number of extinct species, number of extant species, | ||
270 | total species, Spearman correlation coefficient between absolute | 404 | total species, Spearman correlation coefficient between absolute | ||
271 | latitude and species richness (latitude_richness_cor), and diversity | 405 | latitude and species richness (latitude_richness_cor), and diversity | ||
272 | in the Neotropics, Indomalaya, Afrotropics. Also, whether the | 406 | in the Neotropics, Indomalaya, Afrotropics. Also, whether the | ||
273 | simulation generated pantropical distribution of species | 407 | simulation generated pantropical distribution of species | ||
274 | (pantropicality_index), or the pantropical diversity disparity | 408 | (pantropicality_index), or the pantropical diversity disparity | ||
275 | (PDD_index). Finally what time step the simulation exited at (0 for | 409 | (PDD_index). Finally what time step the simulation exited at (0 for | ||
276 | complete simulations).\r\nDataset_S5.csv: Net relatedness index (NRI) | 410 | complete simulations).\r\nDataset_S5.csv: Net relatedness index (NRI) | ||
277 | in three tropical moist forest regions and associated p-values for | 411 | in three tropical moist forest regions and associated p-values for | ||
278 | pantropically distributed taxa.\r\nGen3sis_config_creator.R and | 412 | pantropically distributed taxa.\r\nGen3sis_config_creator.R and | ||
279 | Gen3sis_config_template.R scripts generate the configurations files to | 413 | Gen3sis_config_template.R scripts generate the configurations files to | ||
280 | run the simulation experiment.\r\nGLS.R R script to replicate the | 414 | run the simulation experiment.\r\nGLS.R R script to replicate the | ||
281 | linear modelling analyses.\r\n", | 415 | linear modelling analyses.\r\n", | ||
282 | "doi": "", | 416 | "doi": "", | ||
283 | "format": ".zip", | 417 | "format": ".zip", | ||
284 | "hash": "", | 418 | "hash": "", | ||
285 | "id": "1f9cddb0-7035-4c47-84c7-e2846759f342", | 419 | "id": "1f9cddb0-7035-4c47-84c7-e2846759f342", | ||
286 | "last_modified": null, | 420 | "last_modified": null, | ||
287 | "metadata_modified": "2021-09-15T11:48:21.652594", | 421 | "metadata_modified": "2021-09-15T11:48:21.652594", | ||
288 | "mimetype": null, | 422 | "mimetype": null, | ||
289 | "mimetype_inner": null, | 423 | "mimetype_inner": null, | ||
290 | "name": "", | 424 | "name": "", | ||
291 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | 425 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | ||
n | 292 | "position": 4, | n | 426 | "position": 8, |
293 | "publication_state": "", | 427 | "publication_state": "", | ||
294 | "resource_size": "{\"size_value\": \"\", \"size_units\": | 428 | "resource_size": "{\"size_value\": \"\", \"size_units\": | ||
295 | \"kb\"}", | 429 | \"kb\"}", | ||
296 | "resource_type": null, | 430 | "resource_type": null, | ||
297 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | 431 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | ||
298 | \"shared_secret\": \"\"}", | 432 | \"shared_secret\": \"\"}", | ||
299 | "size": 47630797, | 433 | "size": 47630797, | ||
300 | "state": "active", | 434 | "state": "active", | ||
301 | "url": | 435 | "url": | ||
302 | esource/1f9cddb0-7035-4c47-84c7-e2846759f342/download/envidat_si.zip", | 436 | esource/1f9cddb0-7035-4c47-84c7-e2846759f342/download/envidat_si.zip", | ||
303 | "url_type": "upload" | 437 | "url_type": "upload" | ||
304 | }, | 438 | }, | ||
305 | { | 439 | { | ||
306 | "cache_last_updated": null, | 440 | "cache_last_updated": null, | ||
307 | "cache_url": null, | 441 | "cache_url": null, | ||
n | 308 | "created": "2021-09-15T12:04:28.996114", | n | ||
309 | "description": "Dataset_S2.csv: environmental and species | ||||
310 | richness data. Longitude (x), latitude (y), potential | ||||
311 | evapotranspiration (PET), mean annual temperature (MAT), mean annual | ||||
312 | precipitation), amphibian, bird, mammal, and reptile species richness, | ||||
313 | PC1 and PC2 of environmental PCA and the region. Environmental data | ||||
314 | (from CHELSA and ENVIREM) and species richness summarised from | ||||
315 | published data (vertLife, MOL, IUCN, GARD).", | ||||
316 | "doi": "", | ||||
317 | "format": ".csv", | ||||
318 | "hash": "", | ||||
319 | "id": "7b01096c-5f9a-4d98-8129-125b9a749a27", | ||||
320 | "last_modified": null, | ||||
321 | "metadata_modified": "2021-09-15T12:04:28.975274", | ||||
322 | "mimetype": null, | ||||
323 | "mimetype_inner": null, | ||||
324 | "name": "Dataset S2", | ||||
325 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | ||||
326 | "position": 5, | ||||
327 | "publication_state": "", | ||||
328 | "resource_size": "{\"size_value\": \"\", \"size_units\": | ||||
329 | \"kb\"}", | ||||
330 | "resource_type": null, | ||||
331 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | ||||
332 | \"shared_secret\": \"\"}", | ||||
333 | "size": 207900, | ||||
334 | "state": "active", | ||||
335 | "url": | ||||
336 | esource/7b01096c-5f9a-4d98-8129-125b9a749a27/download/dataset_s2.csv", | ||||
337 | "url_type": "upload" | ||||
338 | }, | ||||
339 | { | ||||
340 | "cache_last_updated": null, | ||||
341 | "cache_url": null, | ||||
342 | "created": "2021-09-15T12:05:05.340288", | 442 | "created": "2021-09-15T11:51:54.396594", | ||
343 | "description": "Dataset_S3.csv: - Paleoenvironmental | ||||
344 | reconstructions (details in the associated SI appendix) including | ||||
345 | latitude (y), longitude (x), and temperature data across 200 myrs at | ||||
346 | 170 kyr intervals.", | ||||
347 | "doi": "", | ||||
348 | "format": ".csv", | ||||
349 | "hash": "", | ||||
350 | "id": "eb9e15a4-70c8-43b9-8ed1-8ae476c66e97", | ||||
351 | "last_modified": null, | ||||
352 | "metadata_modified": "2021-09-15T12:05:05.319503", | ||||
353 | "mimetype": null, | ||||
354 | "mimetype_inner": null, | ||||
355 | "name": "Dataset S3", | ||||
356 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | ||||
357 | "position": 6, | ||||
358 | "publication_state": "", | ||||
359 | "resource_size": "{\"size_value\": \"\", \"size_units\": | ||||
360 | \"kb\"}", | ||||
361 | "resource_type": null, | ||||
362 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | ||||
363 | \"shared_secret\": \"\"}", | ||||
364 | "size": 147810332, | ||||
365 | "state": "active", | ||||
366 | "url": | ||||
367 | esource/eb9e15a4-70c8-43b9-8ed1-8ae476c66e97/download/dataset_s3.csv", | ||||
368 | "url_type": "upload" | ||||
369 | }, | ||||
370 | { | ||||
371 | "cache_last_updated": null, | ||||
372 | "cache_url": null, | ||||
373 | "created": "2021-09-15T12:05:33.383648", | ||||
374 | "description": "Dataset_S4.csv: simulation model parameters and | ||||
375 | diversity summary statistics. Including rate of temperature niche | ||||
376 | evolution (Tev), temperature niche width (TW), divergence threshold | ||||
377 | (S), Dispersal probability distribution shape (WeibullShape) and | ||||
378 | information on number of extinct species, number of extant species, | ||||
379 | total species, Spearman correlation coefficient between absolute | ||||
380 | latitude and species richness (latitude_richness_cor), and diversity | ||||
381 | in the Neotropics, Indomalaya, Afrotropics. Also, whether the | ||||
382 | simulation generated pantropical distribution of species | ||||
383 | (pantropicality_index), or the pantropical diversity disparity | ||||
384 | (PDD_index). Finally what time step the simulation exited at (0 for | ||||
385 | complete simulations).", | ||||
386 | "doi": "", | ||||
387 | "format": ".csv", | ||||
388 | "hash": "", | ||||
389 | "id": "39396f2a-8074-42eb-a846-e05edee2c513", | ||||
390 | "last_modified": null, | ||||
391 | "metadata_modified": "2021-09-15T12:05:33.361264", | ||||
392 | "mimetype": null, | ||||
393 | "mimetype_inner": null, | ||||
394 | "name": "Dataset S4", | ||||
395 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | ||||
396 | "position": 7, | ||||
397 | "publication_state": "", | ||||
398 | "resource_size": "{\"size_value\": \"\", \"size_units\": | ||||
399 | \"kb\"}", | ||||
400 | "resource_type": null, | ||||
401 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | ||||
402 | \"shared_secret\": \"\"}", | ||||
403 | "size": 46904, | ||||
404 | "state": "active", | ||||
405 | "url": | ||||
406 | esource/39396f2a-8074-42eb-a846-e05edee2c513/download/dataset_s4.csv", | ||||
407 | "url_type": "upload" | ||||
408 | }, | ||||
409 | { | ||||
410 | "cache_last_updated": null, | ||||
411 | "cache_url": null, | ||||
412 | "created": "2021-09-15T12:06:02.368837", | ||||
413 | "description": "Dataset_S5.csv: Net relatedness index (NRI) in | ||||
414 | three tropical moist forest regions and associated p-values for | ||||
415 | pantropically distributed taxa.", | ||||
416 | "doi": "", | ||||
417 | "format": ".csv", | ||||
418 | "hash": "", | ||||
419 | "id": "41abc042-7c25-424d-bed2-196912d6e7ab", | ||||
420 | "last_modified": null, | ||||
421 | "metadata_modified": "2021-09-15T12:06:02.347186", | ||||
422 | "mimetype": null, | ||||
423 | "mimetype_inner": null, | ||||
424 | "name": "Dataset S5", | ||||
425 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | ||||
426 | "position": 8, | ||||
427 | "publication_state": "", | ||||
428 | "resource_size": "{\"size_value\": \"\", \"size_units\": | ||||
429 | \"kb\"}", | ||||
430 | "resource_type": null, | ||||
431 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | ||||
432 | \"shared_secret\": \"\"}", | ||||
433 | "size": 1652, | ||||
434 | "state": "active", | ||||
435 | "url": | ||||
436 | esource/41abc042-7c25-424d-bed2-196912d6e7ab/download/dataset_s5.csv", | ||||
437 | "url_type": "upload" | ||||
438 | }, | ||||
439 | { | ||||
440 | "cache_last_updated": null, | ||||
441 | "cache_url": null, | ||||
442 | "created": "2021-09-15T12:09:53.660447", | ||||
443 | "description": "Dataset_S1.csv includes species diversity counts | 443 | "description": "Dataset_S1.csv includes species diversity counts | ||
444 | for 237 clades in tropical moist forests (TMF) in the Neotropics | 444 | for 237 clades in tropical moist forests (TMF) in the Neotropics | ||
445 | (NeotropicalTMF), Indomalaya (IndomalayanTMF), Afrotropics | 445 | (NeotropicalTMF), Indomalaya (IndomalayanTMF), Afrotropics | ||
446 | (AfrotropicalTMF), All three TMF regions together (AllTMF), all | 446 | (AfrotropicalTMF), All three TMF regions together (AllTMF), all | ||
447 | non-TMF regions (NonTMF), and in total (Total). As well as whether the | 447 | non-TMF regions (NonTMF), and in total (Total). As well as whether the | ||
448 | clade is pantropical (Pantropical_clade) and shows the pantropical | 448 | clade is pantropical (Pantropical_clade) and shows the pantropical | ||
449 | diversity disparity (PDD_clade). ", | 449 | diversity disparity (PDD_clade). ", | ||
450 | "doi": "", | 450 | "doi": "", | ||
n | 451 | "format": ".csv", | n | 451 | "format": "", |
452 | "hash": "", | 452 | "hash": "", | ||
n | 453 | "id": "b0817120-8f1f-4d93-af06-524583a82acd", | n | 453 | "id": "5e558880-f6fd-4ec6-ab35-e7d07180d690", |
454 | "last_modified": null, | 454 | "last_modified": null, | ||
n | 455 | "metadata_modified": "2021-09-15T12:09:53.635265", | n | 455 | "metadata_modified": "2021-09-15T12:01:41.711067", |
456 | "mimetype": null, | 456 | "mimetype": null, | ||
457 | "mimetype_inner": null, | 457 | "mimetype_inner": null, | ||
458 | "name": "Dataset S1", | 458 | "name": "Dataset S1", | ||
459 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | 459 | "package_id": "b7783edd-a5bc-4854-8e7d-1698afc875b9", | ||
460 | "position": 9, | 460 | "position": 9, | ||
461 | "publication_state": "", | 461 | "publication_state": "", | ||
462 | "resource_size": "{\"size_value\": \"\", \"size_units\": | 462 | "resource_size": "{\"size_value\": \"\", \"size_units\": | ||
463 | \"kb\"}", | 463 | \"kb\"}", | ||
464 | "resource_type": null, | 464 | "resource_type": null, | ||
465 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | 465 | "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", | ||
466 | \"shared_secret\": \"\"}", | 466 | \"shared_secret\": \"\"}", | ||
467 | "size": 8409, | 467 | "size": 8409, | ||
468 | "state": "active", | 468 | "state": "active", | ||
469 | "url": | 469 | "url": | ||
t | 470 | esource/b0817120-8f1f-4d93-af06-524583a82acd/download/dataset_s1.csv", | t | 470 | esource/5e558880-f6fd-4ec6-ab35-e7d07180d690/download/dataset_s1.csv", |
471 | "url_type": "upload" | 471 | "url_type": "upload" | ||
472 | } | 472 | } | ||
473 | ], | 473 | ], | ||
474 | "spatial": "{\"type\": \"Polygon\", \"coordinates\": [[[5.95587, | 474 | "spatial": "{\"type\": \"Polygon\", \"coordinates\": [[[5.95587, | ||
475 | 45.81802],[5.95587, 47.80838],[10.49203, 47.80838],[10.49203, | 475 | 45.81802],[5.95587, 47.80838],[10.49203, 47.80838],[10.49203, | ||
476 | 45.81802],[5.95587, 45.81802]]]}", | 476 | 45.81802],[5.95587, 45.81802]]]}", | ||
477 | "spatial_info": "Switzerland", | 477 | "spatial_info": "Switzerland", | ||
478 | "state": "active", | 478 | "state": "active", | ||
479 | "subtitle": "", | 479 | "subtitle": "", | ||
480 | "tags": [ | 480 | "tags": [ | ||
481 | { | 481 | { | ||
482 | "display_name": "GEN3SIS", | 482 | "display_name": "GEN3SIS", | ||
483 | "id": "7fd8733b-4feb-438b-a363-65cb5ce4b52a", | 483 | "id": "7fd8733b-4feb-438b-a363-65cb5ce4b52a", | ||
484 | "name": "GEN3SIS", | 484 | "name": "GEN3SIS", | ||
485 | "state": "active", | 485 | "state": "active", | ||
486 | "vocabulary_id": null | 486 | "vocabulary_id": null | ||
487 | }, | 487 | }, | ||
488 | { | 488 | { | ||
489 | "display_name": "MECHANISTIC MODELING", | 489 | "display_name": "MECHANISTIC MODELING", | ||
490 | "id": "64a80515-5864-4aee-9311-9fa9b13b8b5c", | 490 | "id": "64a80515-5864-4aee-9311-9fa9b13b8b5c", | ||
491 | "name": "MECHANISTIC MODELING", | 491 | "name": "MECHANISTIC MODELING", | ||
492 | "state": "active", | 492 | "state": "active", | ||
493 | "vocabulary_id": null | 493 | "vocabulary_id": null | ||
494 | }, | 494 | }, | ||
495 | { | 495 | { | ||
496 | "display_name": "PALEOCLIMATE", | 496 | "display_name": "PALEOCLIMATE", | ||
497 | "id": "5b2c5931-065b-49a9-89a4-b082eaf78e0e", | 497 | "id": "5b2c5931-065b-49a9-89a4-b082eaf78e0e", | ||
498 | "name": "PALEOCLIMATE", | 498 | "name": "PALEOCLIMATE", | ||
499 | "state": "active", | 499 | "state": "active", | ||
500 | "vocabulary_id": null | 500 | "vocabulary_id": null | ||
501 | }, | 501 | }, | ||
502 | { | 502 | { | ||
503 | "display_name": "PANTROPICAL DIVERSITY DISPARITY", | 503 | "display_name": "PANTROPICAL DIVERSITY DISPARITY", | ||
504 | "id": "c1a2995c-32b5-4bb6-9de7-e1f29e697791", | 504 | "id": "c1a2995c-32b5-4bb6-9de7-e1f29e697791", | ||
505 | "name": "PANTROPICAL DIVERSITY DISPARITY", | 505 | "name": "PANTROPICAL DIVERSITY DISPARITY", | ||
506 | "state": "active", | 506 | "state": "active", | ||
507 | "vocabulary_id": null | 507 | "vocabulary_id": null | ||
508 | }, | 508 | }, | ||
509 | { | 509 | { | ||
510 | "display_name": "PLATE TECTONICS", | 510 | "display_name": "PLATE TECTONICS", | ||
511 | "id": "747956ea-3953-4a5e-b63e-0eb7620dea9e", | 511 | "id": "747956ea-3953-4a5e-b63e-0eb7620dea9e", | ||
512 | "name": "PLATE TECTONICS", | 512 | "name": "PLATE TECTONICS", | ||
513 | "state": "active", | 513 | "state": "active", | ||
514 | "vocabulary_id": null | 514 | "vocabulary_id": null | ||
515 | } | 515 | } | ||
516 | ], | 516 | ], | ||
517 | "title": "Data from: Earth history events shaped the evolution of | 517 | "title": "Data from: Earth history events shaped the evolution of | ||
518 | uneven biodiversity across tropical moist forests", | 518 | uneven biodiversity across tropical moist forests", | ||
519 | "type": "dataset", | 519 | "type": "dataset", | ||
520 | "url": null, | 520 | "url": null, | ||
521 | "version": "1.0" | 521 | "version": "1.0" | ||
522 | } | 522 | } |