Changes
On January 11, 2024 at 3:08:12 PM UTC, Jokin Idoate-Lacasia:
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Set format of resource Long_term_biomass_script.Rmd to rmd (previously Rmd) in Long-term biomass dynamics of temperate forests in Europe after cessation of management
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Updated description of resource Long_term_biomass_script.Rmd in Long-term biomass dynamics of temperate forests in Europe after cessation of management to
R markdown document used to download the data files, reproduce the analysis and plot generation.
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Changed value of field
resource_size
of resource Long_term_biomass_script.Rmd to{"size_value":"","size_units":""}
(previously{"size_value":"","size_units":"kb"}
) in Long-term biomass dynamics of temperate forests in Europe after cessation of management
f | 1 | { | f | 1 | { |
2 | "author": "[{\"affiliation\": \"Swiss Federal Institute for Forest, | 2 | "author": "[{\"affiliation\": \"Swiss Federal Institute for Forest, | ||
3 | Snow and Landscape Research WSL\", \"affiliation_02\": \"\", | 3 | Snow and Landscape Research WSL\", \"affiliation_02\": \"\", | ||
4 | \"affiliation_03\": \"\", \"email\": \"jokin.lacasia@wsl.ch\", | 4 | \"affiliation_03\": \"\", \"email\": \"jokin.lacasia@wsl.ch\", | ||
5 | \"given_name\": \"Jokin\", \"identifier\": \"0009-0005-4709-0861\", | 5 | \"given_name\": \"Jokin\", \"identifier\": \"0009-0005-4709-0861\", | ||
6 | \"name\": \"Idoate-Lacasia\"}, {\"affiliation\": \"Swiss Federal | 6 | \"name\": \"Idoate-Lacasia\"}, {\"affiliation\": \"Swiss Federal | ||
7 | Research Institute WSL, Z\\u00fcrcherstrasse 111, 8903 Birmensdorf, | 7 | Research Institute WSL, Z\\u00fcrcherstrasse 111, 8903 Birmensdorf, | ||
8 | Switzerland\", \"affiliation_02\": \"\", \"affiliation_03\": \"\", | 8 | Switzerland\", \"affiliation_02\": \"\", \"affiliation_03\": \"\", | ||
9 | \"email\": \"jonas.stillhard@wsl.ch\", \"given_name\": \"Jonas\", | 9 | \"email\": \"jonas.stillhard@wsl.ch\", \"given_name\": \"Jonas\", | ||
10 | \"identifier\": \"0000-0001-8850-4817\", \"name\": \"Stillhard\"}, | 10 | \"identifier\": \"0000-0001-8850-4817\", \"name\": \"Stillhard\"}, | ||
11 | {\"affiliation\": \"WSL\", \"affiliation_02\": \"\", | 11 | {\"affiliation\": \"WSL\", \"affiliation_02\": \"\", | ||
12 | \"affiliation_03\": \"\", \"email\": \"jeanne.portier@wsl.ch\", | 12 | \"affiliation_03\": \"\", \"email\": \"jeanne.portier@wsl.ch\", | ||
13 | \"given_name\": \"Jeanne\", \"identifier\": \"0000-0002-9706-5155\", | 13 | \"given_name\": \"Jeanne\", \"identifier\": \"0000-0002-9706-5155\", | ||
14 | \"name\": \"Portier\"}, {\"affiliation\": \"WSL\", \"affiliation_02\": | 14 | \"name\": \"Portier\"}, {\"affiliation\": \"WSL\", \"affiliation_02\": | ||
15 | \"\", \"affiliation_03\": \"\", \"email\": \"peter.brang@wsl.ch\", | 15 | \"\", \"affiliation_03\": \"\", \"email\": \"peter.brang@wsl.ch\", | ||
16 | \"given_name\": \"Peter\", \"identifier\": \"\", \"name\": \"Brang\"}, | 16 | \"given_name\": \"Peter\", \"identifier\": \"\", \"name\": \"Brang\"}, | ||
17 | {\"affiliation\": \"Forest Ecology, Department of Environmental | 17 | {\"affiliation\": \"Forest Ecology, Department of Environmental | ||
18 | Systems Science, ETH\", \"affiliation_02\": \"\", \"affiliation_03\": | 18 | Systems Science, ETH\", \"affiliation_02\": \"\", \"affiliation_03\": | ||
19 | \"\", \"email\": \"christof.bigler@env.ethz.ch\", \"given_name\": | 19 | \"\", \"email\": \"christof.bigler@env.ethz.ch\", \"given_name\": | ||
20 | \"Christof\", \"identifier\": \"0000-0003-3757-6356\", \"name\": | 20 | \"Christof\", \"identifier\": \"0000-0003-3757-6356\", \"name\": | ||
21 | \"Bigler\"}, {\"affiliation\": \"ETHZ\", \"affiliation_02\": \"\", | 21 | \"Bigler\"}, {\"affiliation\": \"ETHZ\", \"affiliation_02\": \"\", | ||
22 | \"affiliation_03\": \"\", \"email\": \"harald.bugmann@env.ethz.ch\", | 22 | \"affiliation_03\": \"\", \"email\": \"harald.bugmann@env.ethz.ch\", | ||
23 | \"given_name\": \"Harald\", \"identifier\": \"0000-0003-4233-0094\", | 23 | \"given_name\": \"Harald\", \"identifier\": \"0000-0003-4233-0094\", | ||
24 | \"name\": \"Bugmann\"}, {\"affiliation\": \"Swiss Federal Research | 24 | \"name\": \"Bugmann\"}, {\"affiliation\": \"Swiss Federal Research | ||
25 | Institute WSL, Z\\u00fcrcherstrasse 111, 8903 Birmensdorf, | 25 | Institute WSL, Z\\u00fcrcherstrasse 111, 8903 Birmensdorf, | ||
26 | Switzerland\", \"affiliation_02\": \"\", \"affiliation_03\": \"\", | 26 | Switzerland\", \"affiliation_02\": \"\", \"affiliation_03\": \"\", | ||
27 | \"email\": \"martina.hobi@wsl.ch\", \"given_name\": \"Martina\", | 27 | \"email\": \"martina.hobi@wsl.ch\", \"given_name\": \"Martina\", | ||
28 | \"identifier\": \"\", \"name\": \"Hobi\"}]", | 28 | \"identifier\": \"\", \"name\": \"Hobi\"}]", | ||
29 | "author_email": null, | 29 | "author_email": null, | ||
30 | "creator_user_id": "7e58a341-c910-4f56-9cd5-70a0b43e18d1", | 30 | "creator_user_id": "7e58a341-c910-4f56-9cd5-70a0b43e18d1", | ||
31 | "date": "[{\"date\": \"2024-01-10\", \"date_type\": \"created\", | 31 | "date": "[{\"date\": \"2024-01-10\", \"date_type\": \"created\", | ||
32 | \"end_date\": \"2024-01-10\"}]", | 32 | \"end_date\": \"2024-01-10\"}]", | ||
33 | "doi": "10.16904/envidat.475", | 33 | "doi": "10.16904/envidat.475", | ||
34 | "funding": "[{\"grant_number\": \"\", \"institution\": \"Federal | 34 | "funding": "[{\"grant_number\": \"\", \"institution\": \"Federal | ||
35 | Office for the Environment (FOEN)\", \"institution_url\": \"\"}]", | 35 | Office for the Environment (FOEN)\", \"institution_url\": \"\"}]", | ||
36 | "groups": [], | 36 | "groups": [], | ||
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38 | "isopen": true, | 38 | "isopen": true, | ||
39 | "language": "en", | 39 | "language": "en", | ||
40 | "license_id": "cc-by-sa", | 40 | "license_id": "cc-by-sa", | ||
41 | "license_title": "Creative Commons Attribution Share-Alike | 41 | "license_title": "Creative Commons Attribution Share-Alike | ||
42 | (CC-BY-SA)", | 42 | (CC-BY-SA)", | ||
43 | "license_url": "https://creativecommons.org/licenses/by-sa/4.0/", | 43 | "license_url": "https://creativecommons.org/licenses/by-sa/4.0/", | ||
44 | "maintainer": "{\"affiliation\": \"\", \"email\": | 44 | "maintainer": "{\"affiliation\": \"\", \"email\": | ||
45 | \"jokin.lacasia@wsl.ch\", \"given_name\": \"Jokin\", \"identifier\": | 45 | \"jokin.lacasia@wsl.ch\", \"given_name\": \"Jokin\", \"identifier\": | ||
46 | \"\", \"name\": \"Idoate-Lacasia\"}", | 46 | \"\", \"name\": \"Idoate-Lacasia\"}", | ||
47 | "maintainer_email": null, | 47 | "maintainer_email": null, | ||
48 | "metadata_created": "2024-01-10T20:14:08.869734", | 48 | "metadata_created": "2024-01-10T20:14:08.869734", | ||
n | 49 | "metadata_modified": "2024-01-11T15:05:49.260940", | n | 49 | "metadata_modified": "2024-01-11T15:08:12.931550", |
50 | "name": "biomass-dynamics-temperate-forests-in-europe", | 50 | "name": "biomass-dynamics-temperate-forests-in-europe", | ||
51 | "notes": "This dataset documents the analyses and the plot | 51 | "notes": "This dataset documents the analyses and the plot | ||
52 | generation for the manuscript **Long-term biomass dynamics in | 52 | generation for the manuscript **Long-term biomass dynamics in | ||
53 | temperate forests in Europe after cessation of management**. \nWe | 53 | temperate forests in Europe after cessation of management**. \nWe | ||
54 | analyse biomass development in an extensive network of 224 plots in 37 | 54 | analyse biomass development in an extensive network of 224 plots in 37 | ||
55 | natural forest reserves (NFR) covering a wide environmental gradient | 55 | natural forest reserves (NFR) covering a wide environmental gradient | ||
56 | with mean annual temperatures ranging from 1 to 10.4 \u00b0C and mean | 56 | with mean annual temperatures ranging from 1 to 10.4 \u00b0C and mean | ||
57 | annual precipitation ranging from 901 to 2317 mm. Forest inventories | 57 | annual precipitation ranging from 901 to 2317 mm. Forest inventories | ||
58 | have been conducted approximately every 10 years during the last 60 | 58 | have been conducted approximately every 10 years during the last 60 | ||
59 | years.\n\nIt consists of the following files:\n+ | 59 | years.\n\nIt consists of the following files:\n+ | ||
60 | **Long_term_biomass_script.Rmd**: R markdown document to reproduce the | 60 | **Long_term_biomass_script.Rmd**: R markdown document to reproduce the | ||
61 | analysis and the plot generation.\n+ **dat_biomass.RDS**: Biomass | 61 | analysis and the plot generation.\n+ **dat_biomass.RDS**: Biomass | ||
62 | values for each permanent plot at each inventory. This dataset is used | 62 | values for each permanent plot at each inventory. This dataset is used | ||
63 | for data exploration and for the Biomass model, and to create Figure 2 | 63 | for data exploration and for the Biomass model, and to create Figure 2 | ||
64 | and Figure 3.\n+ **dat_biomass_change.RDS**: Biomass change values | 64 | and Figure 3.\n+ **dat_biomass_change.RDS**: Biomass change values | ||
65 | between inventories for each permanent plot. It includes the | 65 | between inventories for each permanent plot. It includes the | ||
66 | explanatory variables as well. This dataset is used for the Biomass | 66 | explanatory variables as well. This dataset is used for the Biomass | ||
67 | change model and to create Figure 4 and Figure 5.\n+ | 67 | change model and to create Figure 4 and Figure 5.\n+ | ||
68 | **NFI_climspace_netCDF.RDS**: Climatic space covered by the Swiss | 68 | **NFI_climspace_netCDF.RDS**: Climatic space covered by the Swiss | ||
69 | National Forest Inventory (NFI) that is used in Figure 5.\n", | 69 | National Forest Inventory (NFI) that is used in Figure 5.\n", | ||
70 | "num_resources": 4, | 70 | "num_resources": 4, | ||
71 | "num_tags": 5, | 71 | "num_tags": 5, | ||
72 | "organization": { | 72 | "organization": { | ||
73 | "approval_status": "approved", | 73 | "approval_status": "approved", | ||
74 | "created": "2018-05-28T16:14:38.566274", | 74 | "created": "2018-05-28T16:14:38.566274", | ||
75 | "description": "We study stand dynamics and how they can be | 75 | "description": "We study stand dynamics and how they can be | ||
76 | influenced by man. We thereby focus on the following topics:\r\n\r\n* | 76 | influenced by man. We thereby focus on the following topics:\r\n\r\n* | ||
77 | Growth and yield research\r\n\r\n* Forest dynamics in forest | 77 | Growth and yield research\r\n\r\n* Forest dynamics in forest | ||
78 | reserves\r\n\r\n* Virgin forest research in the Ukraine\r\n\r\n* | 78 | reserves\r\n\r\n* Virgin forest research in the Ukraine\r\n\r\n* | ||
79 | Adaptation of forest trees to climate change\r\n\r\n* Close-to-nature | 79 | Adaptation of forest trees to climate change\r\n\r\n* Close-to-nature | ||
80 | silvicultural strategies\r\n\r\n* Forest succession and young forest | 80 | silvicultural strategies\r\n\r\n* Forest succession and young forest | ||
81 | tending\r\n\r\n* Forest-ungulate interactions and browsing\r\n\r\nWe | 81 | tending\r\n\r\n* Forest-ungulate interactions and browsing\r\n\r\nWe | ||
82 | maintain and manage a net of long-term permanent plots and use the | 82 | maintain and manage a net of long-term permanent plots and use the | ||
83 | data in simulation models of forest dynamics. Our research contributes | 83 | data in simulation models of forest dynamics. Our research contributes | ||
84 | to an ecologically, economically and socially sustainable forest | 84 | to an ecologically, economically and socially sustainable forest | ||
85 | management.", | 85 | management.", | ||
86 | "id": "29c6cc65-4b0e-4fe5-9d4a-f1e370191789", | 86 | "id": "29c6cc65-4b0e-4fe5-9d4a-f1e370191789", | ||
87 | "image_url": "2018-09-10-072849.510334BuWselection.jpg", | 87 | "image_url": "2018-09-10-072849.510334BuWselection.jpg", | ||
88 | "is_organization": true, | 88 | "is_organization": true, | ||
89 | "name": "stand-dynamics-and-silviculture", | 89 | "name": "stand-dynamics-and-silviculture", | ||
90 | "state": "active", | 90 | "state": "active", | ||
91 | "title": "Stand Dynamics and Silviculture", | 91 | "title": "Stand Dynamics and Silviculture", | ||
92 | "type": "organization" | 92 | "type": "organization" | ||
93 | }, | 93 | }, | ||
94 | "owner_org": "29c6cc65-4b0e-4fe5-9d4a-f1e370191789", | 94 | "owner_org": "29c6cc65-4b0e-4fe5-9d4a-f1e370191789", | ||
95 | "private": false, | 95 | "private": false, | ||
96 | "publication": "{\"publication_year\": \"2024\", \"publisher\": | 96 | "publication": "{\"publication_year\": \"2024\", \"publisher\": | ||
97 | \"EnviDat\"}", | 97 | \"EnviDat\"}", | ||
98 | "publication_state": "published", | 98 | "publication_state": "published", | ||
99 | "related_datasets": "* | 99 | "related_datasets": "* | ||
100 | s://www.envidat.ch/dataset/forest-reserves-monitoring-in-switzerland", | 100 | s://www.envidat.ch/dataset/forest-reserves-monitoring-in-switzerland", | ||
101 | "related_publications": "", | 101 | "related_publications": "", | ||
102 | "relationships_as_object": [], | 102 | "relationships_as_object": [], | ||
103 | "relationships_as_subject": [], | 103 | "relationships_as_subject": [], | ||
104 | "resource_type": "dataset", | 104 | "resource_type": "dataset", | ||
105 | "resource_type_general": "dataset", | 105 | "resource_type_general": "dataset", | ||
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112 | inventory. This dataset is used for data exploration and for the | 112 | inventory. This dataset is used for data exploration and for the | ||
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213 | 6e-5eb6-4870-ad14-0cc350d69e07/download/long_term_biomass_script.rmd", | 214 | 6e-5eb6-4870-ad14-0cc350d69e07/download/long_term_biomass_script.rmd", | ||
214 | "url_type": "upload" | 215 | "url_type": "upload" | ||
215 | } | 216 | } | ||
216 | ], | 217 | ], | ||
217 | "spatial": | 218 | "spatial": | ||
218 | 838],[10.49203,47.80838],[10.49203,45.81802],[5.95587,45.81802]]]}]}", | 219 | 838],[10.49203,47.80838],[10.49203,45.81802],[5.95587,45.81802]]]}]}", | ||
219 | "spatial_info": "Switzerland", | 220 | "spatial_info": "Switzerland", | ||
220 | "state": "active", | 221 | "state": "active", | ||
221 | "subtitle": "", | 222 | "subtitle": "", | ||
222 | "tags": [ | 223 | "tags": [ | ||
223 | { | 224 | { | ||
224 | "display_name": "BIOMASS DYNAMICS", | 225 | "display_name": "BIOMASS DYNAMICS", | ||
225 | "id": "16366af6-649c-4838-ab7e-a786bfde8f42", | 226 | "id": "16366af6-649c-4838-ab7e-a786bfde8f42", | ||
226 | "name": "BIOMASS DYNAMICS", | 227 | "name": "BIOMASS DYNAMICS", | ||
227 | "state": "active", | 228 | "state": "active", | ||
228 | "vocabulary_id": null | 229 | "vocabulary_id": null | ||
229 | }, | 230 | }, | ||
230 | { | 231 | { | ||
231 | "display_name": "CARBON STORAGE", | 232 | "display_name": "CARBON STORAGE", | ||
232 | "id": "e2fdc1e9-49e8-43e7-bf8f-28e6c52b3557", | 233 | "id": "e2fdc1e9-49e8-43e7-bf8f-28e6c52b3557", | ||
233 | "name": "CARBON STORAGE", | 234 | "name": "CARBON STORAGE", | ||
234 | "state": "active", | 235 | "state": "active", | ||
235 | "vocabulary_id": null | 236 | "vocabulary_id": null | ||
236 | }, | 237 | }, | ||
237 | { | 238 | { | ||
238 | "display_name": "ENVIRONMENTAL GRADIENTS", | 239 | "display_name": "ENVIRONMENTAL GRADIENTS", | ||
239 | "id": "8e54dbf2-a323-4b66-8634-f605181e331b", | 240 | "id": "8e54dbf2-a323-4b66-8634-f605181e331b", | ||
240 | "name": "ENVIRONMENTAL GRADIENTS", | 241 | "name": "ENVIRONMENTAL GRADIENTS", | ||
241 | "state": "active", | 242 | "state": "active", | ||
242 | "vocabulary_id": null | 243 | "vocabulary_id": null | ||
243 | }, | 244 | }, | ||
244 | { | 245 | { | ||
245 | "display_name": "FOREST INVENTORY", | 246 | "display_name": "FOREST INVENTORY", | ||
246 | "id": "d1b2883f-be82-426b-8a5e-fd6d36bc2855", | 247 | "id": "d1b2883f-be82-426b-8a5e-fd6d36bc2855", | ||
247 | "name": "FOREST INVENTORY", | 248 | "name": "FOREST INVENTORY", | ||
248 | "state": "active", | 249 | "state": "active", | ||
249 | "vocabulary_id": null | 250 | "vocabulary_id": null | ||
250 | }, | 251 | }, | ||
251 | { | 252 | { | ||
252 | "display_name": "FOREST RESERVES", | 253 | "display_name": "FOREST RESERVES", | ||
253 | "id": "471aaba9-254b-4e64-9f6e-4168bf2435af", | 254 | "id": "471aaba9-254b-4e64-9f6e-4168bf2435af", | ||
254 | "name": "FOREST RESERVES", | 255 | "name": "FOREST RESERVES", | ||
255 | "state": "active", | 256 | "state": "active", | ||
256 | "vocabulary_id": null | 257 | "vocabulary_id": null | ||
257 | } | 258 | } | ||
258 | ], | 259 | ], | ||
259 | "title": "Long-term biomass dynamics of temperate forests in Europe | 260 | "title": "Long-term biomass dynamics of temperate forests in Europe | ||
260 | after cessation of management", | 261 | after cessation of management", | ||
261 | "type": "dataset", | 262 | "type": "dataset", | ||
262 | "url": null, | 263 | "url": null, | ||
263 | "version": "1.0" | 264 | "version": "1.0" | ||
264 | } | 265 | } |