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  "author": "[{\"affiliation\": \"WSL\", \"affiliation_02\": \"\", 
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\"curation\", \"publication\"], \"email\": \"merin.chacko@wsl.ch\", 
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\"curation\", \"publication\"], \"email\": \"merin.chacko@wsl.ch\", 
            
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\"given_name\": \"Merin\", \"identifier\": \"0000-0002-6069-4281\", 
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\"given_name\": \"Merin\", \"identifier\": \"0000-0002-6069-4281\", 
            
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\"name\": \"Reji Chacko\"}, {\"affiliation\": \"WSL\", 
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\"name\": \"Reji Chacko\"}, {\"affiliation\": \"WSL\", 
            
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\"affiliation_02\": \"\", \"affiliation_03\": \"\", \"data_credit\": 
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[\"collection\", \"curation\", \"publication\"], \"email\": 
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[\"collection\", \"curation\", \"publication\"], \"email\": 
            
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\"fabian.fopp@wsl.ch\", \"given_name\": \"Fabian\", \"identifier\": 
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\"fabian.fopp@wsl.ch\", \"given_name\": \"Fabian\", \"identifier\": 
            
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\"0000-0003-0648-8484\", \"name\": \"Fopp\"}, {\"affiliation\": \"WSL, 
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\"0000-0003-0648-8484\", \"name\": \"Fopp\"}, {\"affiliation\": \"WSL, 
            
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ETH\", \"affiliation_02\": \"\", \"affiliation_03\": \"\", 
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ETH\", \"affiliation_02\": \"\", \"affiliation_03\": \"\", 
            
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\"data_credit\": [\"collection\", \"publication\"], \"email\": 
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\"data_credit\": [\"collection\", \"publication\"], \"email\": 
            
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\"thomas.keggin@usys.ethz.ch\", \"given_name\": \"Thomas\", 
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\"thomas.keggin@usys.ethz.ch\", \"given_name\": \"Thomas\", 
            
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\"identifier\": \"\", \"name\": \"Keggin\"}, {\"affiliation\": \"Unit 
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\"identifier\": \"\", \"name\": \"Keggin\"}, {\"affiliation\": \"Unit 
            
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of Land Change Science, Swiss Federal Research Institute WSL, 
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of Land Change Science, Swiss Federal Research Institute WSL, 
            
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Birmensdorf, Switzerland\", \"affiliation_02\": \"\", 
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Birmensdorf, Switzerland\", \"affiliation_02\": \"\", 
            
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\"affiliation_03\": \"\", \"data_credit\": [\"collection\", 
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\"affiliation_03\": \"\", \"data_credit\": [\"collection\", 
            
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\"publication\"], \"email\": \"conor.waldock@unibe.ch\", 
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\"publication\"], \"email\": \"conor.waldock@unibe.ch\", 
            
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\"given_name\": \"Conor\", \"identifier\": \"0000-0002-2818-9859\", 
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\"given_name\": \"Conor\", \"identifier\": \"0000-0002-2818-9859\", 
            
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\"name\": \"Waldock\"}, {\"affiliation\": \"WSL, ETH\", 
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\"name\": \"Waldock\"}, {\"affiliation\": \"WSL, ETH\", 
            
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\"affiliation_02\": \"\", \"affiliation_03\": \"\", \"data_credit\": 
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\"affiliation_02\": \"\", \"affiliation_03\": \"\", \"data_credit\": 
            
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[\"collection\", \"publication\"], \"email\": 
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[\"collection\", \"publication\"], \"email\": 
            
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\"eilishrichards@gmail.com\", \"given_name\": \"Eilish\", 
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\"eilishrichards@gmail.com\", \"given_name\": \"Eilish\", 
            
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\"identifier\": \"\", \"name\": \"Richards\"}, {\"affiliation\": 
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\"identifier\": \"\", \"name\": \"Richards\"}, {\"affiliation\": 
            
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\"Landscape Ecology, Institute of Terrestrial Ecosystems, ETH 
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\"Landscape Ecology, Institute of Terrestrial Ecosystems, ETH 
            
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Z\\u00fcrich, 8049 Z\\u00fcrich, Switzerland\", \"affiliation_02\": 
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Z\\u00fcrich, 8049 Z\\u00fcrich, Switzerland\", \"affiliation_02\": 
            
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\"\", \"affiliation_03\": \"\", \"data_credit\": [\"publication\", 
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\"\", \"affiliation_03\": \"\", \"data_credit\": [\"publication\", 
            
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\"supervision\"], \"email\": \"loic.pellissier@wsl.ch\", 
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\"supervision\"], \"email\": \"loic.pellissier@wsl.ch\", 
            
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\"given_name\": \"Loic\", \"identifier\": \"0000-0002-2289-8259\", 
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\"given_name\": \"Loic\", \"identifier\": \"0000-0002-2289-8259\", 
            
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\"name\": \"Pellissier\"}]",
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\"name\": \"Pellissier\"}]",
            
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  "author_email": null,
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  "author_email": null,
            
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  "creator_user_id": "adc05669-b377-4101-b441-b9bcb92437df",
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  "creator_user_id": "adc05669-b377-4101-b441-b9bcb92437df",
            
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  "date": "[{\"date\": \"2020-06-22\", \"date_type\": \"collected\", 
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  "date": "[{\"date\": \"2020-06-22\", \"date_type\": \"collected\", 
            
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\"end_date\": \"2020-06-26\"}]",
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\"end_date\": \"2020-06-26\"}]",
            
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  "doi": "10.16904/envidat.409",
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  "doi": "10.16904/envidat.409",
            
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  "funding": "[{\"grant_number\": \"\", \"institution\": \"Swiss 
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  "funding": "[{\"grant_number\": \"\", \"institution\": \"Swiss 
            
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Federal Office of the Environment (FOEN)\", \"institution_url\": 
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Federal Office of the Environment (FOEN)\", \"institution_url\": 
            
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\"https://www.bafu.admin.ch/bafu/en/home.html\"}]",
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\"https://www.bafu.admin.ch/bafu/en/home.html\"}]",
            
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  "groups": [],
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  "groups": [],
            
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  "id": "f1df9abc-3fb8-4253-83a8-733f712ef768",
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  "id": "f1df9abc-3fb8-4253-83a8-733f712ef768",
            
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  "isopen": true,
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  "isopen": true,
            
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  "language": "en",
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  "language": "en",
            
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  "license_id": "cc-by-sa",
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  "license_id": "cc-by-sa",
            
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  "license_title": "Creative Commons Attribution Share-Alike 
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  "license_title": "Creative Commons Attribution Share-Alike 
            
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(CC-BY-SA)",
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(CC-BY-SA)",
            
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  "license_url": "https://creativecommons.org/licenses/by-sa/4.0/",
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  "license_url": "https://creativecommons.org/licenses/by-sa/4.0/",
            
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  "maintainer": "{\"affiliation\": \"\", \"email\": 
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  "maintainer": "{\"affiliation\": \"\", \"email\": 
            
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\"merin.rejichacko@gmail.com\", \"given_name\": \"Merin\", 
48
\"merin.rejichacko@gmail.com\", \"given_name\": \"Merin\", 
            
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\"identifier\": \"\", \"name\": \"Reji Chacko\"}",
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\"identifier\": \"\", \"name\": \"Reji Chacko\"}",
            
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  "maintainer_email": null,
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  "maintainer_email": null,
            
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  "metadata_created": "2023-06-06T19:26:17.207182",
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  "metadata_created": "2023-06-06T19:26:17.207182",
            
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  "metadata_modified": "2023-08-03T12:38:58.459496",
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  "metadata_modified": "2023-08-03T14:35:47.220857",
            
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  "name": "catchment-biodiversity-vaud-edna",
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  "name": "catchment-biodiversity-vaud-edna",
            
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  "notes": "This dataset contains the results of a five-day field 
54
  "notes": "This dataset contains the results of a five-day field 
            
55
excursion which the extent to which eDNA sampling can capture the 
55
excursion which the extent to which eDNA sampling can capture the 
            
56
diversity of a region with highly heterogeneous habitat patches across 
56
diversity of a region with highly heterogeneous habitat patches across 
            
57
a wide elevation gradient through multiple hydrological catchments of 
57
a wide elevation gradient through multiple hydrological catchments of 
            
58
the Swiss Alps. Using peristaltic pumps, we filtered 60 L of water at 
58
the Swiss Alps. Using peristaltic pumps, we filtered 60 L of water at 
            
59
five sites per catchment for a total volume of 1 800 L. Using an eDNA 
59
five sites per catchment for a total volume of 1 800 L. Using an eDNA 
            
60
metabarcoding approach focusing on vertebrates and plants, we detected 
60
metabarcoding approach focusing on vertebrates and plants, we detected 
            
61
86 vertebrate taxa spanning 41 families and 263 plant taxa spanning 79 
61
86 vertebrate taxa spanning 41 families and 263 plant taxa spanning 79 
            
62
families across ten catchments. This dataset includes two sets of 
62
families across ten catchments. This dataset includes two sets of 
            
63
data. The first (Genomic data) includes all the necessary data for the 
63
data. The first (Genomic data) includes all the necessary data for the 
            
64
bioinformatic pipeline, whereas the second (Analysis Figures) contains 
64
bioinformatic pipeline, whereas the second (Analysis Figures) contains 
            
65
tidied data and scripts for the reproduction of all figures/analyses 
65
tidied data and scripts for the reproduction of all figures/analyses 
            
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in the article describing this study.",
66
in the article describing this study.",
            
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  "num_resources": 3,
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  "num_resources": 3,
            
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  "num_tags": 5,
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  "num_tags": 5,
            
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  "organization": {
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  "organization": {
            
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    "approval_status": "approved",
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    "approval_status": "approved",
            
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    "created": "2018-12-01T11:59:01.791513",
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    "created": "2018-12-01T11:59:01.791513",
            
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    "description": "Our laboratory aims at understanding and 
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    "description": "Our laboratory aims at understanding and 
            
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forecasting the response of biodiversity to landscape changes. We 
73
forecasting the response of biodiversity to landscape changes. We 
            
74
investigate the historical responses of species to past changes such 
74
investigate the historical responses of species to past changes such 
            
75
as plate tectonics or the glaciations of the Quaternary and 
75
as plate tectonics or the glaciations of the Quaternary and 
            
76
contemporary responses to ongoing global changes. We develop spatial 
76
contemporary responses to ongoing global changes. We develop spatial 
            
77
mechanistic models of biodiversity that account for processes such as 
77
mechanistic models of biodiversity that account for processes such as 
            
78
dispersal and biotic interactions.",
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dispersal and biotic interactions.",
            
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    "id": "153392ee-d556-4b16-a330-dedb177e87f9",
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    "id": "153392ee-d556-4b16-a330-dedb177e87f9",
            
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    "image_url": "2018-12-01-105921.8275952000px-LogoWSL.svg.png",
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    "image_url": "2018-12-01-105921.8275952000px-LogoWSL.svg.png",
            
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    "is_organization": true,
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    "is_organization": true,
            
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    "name": "ele-group",
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    "name": "ele-group",
            
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    "state": "active",
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    "state": "active",
            
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    "title": "Ecosystems and Landscape Evolution",
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    "title": "Ecosystems and Landscape Evolution",
            
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    "type": "organization"
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    "type": "organization"
            
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  },
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  },
            
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  "owner_org": "153392ee-d556-4b16-a330-dedb177e87f9",
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  "owner_org": "153392ee-d556-4b16-a330-dedb177e87f9",
            
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  "private": false,
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  "private": false,
            
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  "publication": "{\"publication_year\": \"2023\", \"publisher\": 
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  "publication": "{\"publication_year\": \"2023\", \"publisher\": 
            
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\"EnviDat\"}",
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\"EnviDat\"}",
            
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  "publication_state": "published",
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  "publication_state": "published",
            
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  "related_datasets": "Please see the publication (currently under 
92
  "related_datasets": "Please see the publication (currently under 
            
93
revision) for a full summary of all datasets and papers associated 
93
revision) for a full summary of all datasets and papers associated 
            
94
with this present dataset.",
94
with this present dataset.",
            
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  "related_publications": "This dataset corrresponds to the study 
95
  "related_publications": "This dataset corrresponds to the study 
            
96
described in the paper: Reji Chacko et al (2023) Catchment-based 
96
described in the paper: Reji Chacko et al (2023) Catchment-based 
            
97
sampling of river eDNA integrates terrestrial and aquatic biodiversity 
97
sampling of river eDNA integrates terrestrial and aquatic biodiversity 
            
t
98
of alpine landscapes. Oecologia (Accepted).",
t
98
of alpine landscapes. Oecologia (Accepted). DOI: 
            
99
10.1007/s00442-023-05428-4",
            
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  "relationships_as_object": [],
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  "relationships_as_object": [],
            
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  "relationships_as_subject": [],
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  "resource_type": "dataset",
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  "resource_type": "dataset",
            
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  "resources": [
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      "created": "2023-06-06T19:38:19.156383",
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      "created": "2023-06-06T19:38:19.156383",
            
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      "description": "Fastq files, primer descriptions and the final 
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output dataset.",
            
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      "url": 
            
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h.ch/envicloud/doi/envidat.409/eDNA_paper_bioinformatic_pipeline.zip",
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of sampling, as well as the identity of the samplers and relevant 
            
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comments.",
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comments.",
            
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datasets required to run the analyses. A README describes the columns 
169
datasets required to run the analyses. A README describes the columns 
            
169
in each dataset. ",
170
in each dataset. ",
            
170
      "doi": "",
171
      "doi": "",
            
171
      "format": ".zip",
172
      "format": ".zip",
            
172
      "hash": "",
173
      "hash": "",
            
173
      "id": "a255cdf5-9d88-4ba7-83af-df37d3c6e665",
174
      "id": "a255cdf5-9d88-4ba7-83af-df37d3c6e665",
            
174
      "last_modified": null,
175
      "last_modified": null,
            
175
      "metadata_modified": "2023-06-06T19:53:44.252172",
176
      "metadata_modified": "2023-06-06T19:53:44.252172",
            
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      "mimetype": null,
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      "mimetype": null,
            
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      "mimetype_inner": null,
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      "mimetype_inner": null,
            
178
      "name": "Analysis and Figures",
179
      "name": "Analysis and Figures",
            
179
      "package_id": "f1df9abc-3fb8-4253-83a8-733f712ef768",
180
      "package_id": "f1df9abc-3fb8-4253-83a8-733f712ef768",
            
180
      "position": 2,
181
      "position": 2,
            
181
      "publication_state": "",
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      "publication_state": "",
            
182
      "resource_size": "{\"size_value\": \"\", \"size_units\": 
183
      "resource_size": "{\"size_value\": \"\", \"size_units\": 
            
183
\"kb\"}",
184
\"kb\"}",
            
184
      "resource_type": null,
185
      "resource_type": null,
            
185
      "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", 
186
      "restricted": "{\"level\": \"public\", \"allowed_users\": \"\", 
            
186
\"shared_secret\": \"\"}",
187
\"shared_secret\": \"\"}",
            
187
      "size": 238547,
188
      "size": 238547,
            
188
      "state": "active",
189
      "state": "active",
            
189
      "url": 
190
      "url": 
            
190
255cdf5-9d88-4ba7-83af-df37d3c6e665/download/02_analysis_figures.zip",
191
255cdf5-9d88-4ba7-83af-df37d3c6e665/download/02_analysis_figures.zip",
            
191
      "url_type": "upload"
192
      "url_type": "upload"
            
192
    }
193
    }
            
193
  ],
194
  ],
            
194
  "spatial": 
195
  "spatial": 
            
195
64393195,46.18765862505345],[6.857940657064319,46.18765862505345]]]}",
196
64393195,46.18765862505345],[6.857940657064319,46.18765862505345]]]}",
            
196
  "spatial_info": "Switzerland",
197
  "spatial_info": "Switzerland",
            
197
  "state": "active",
198
  "state": "active",
            
198
  "subtitle": "",
199
  "subtitle": "",
            
199
  "tags": [
200
  "tags": [
            
200
    {
201
    {
            
201
      "display_name": "BIODIVERSITY ASSESSMENT",
202
      "display_name": "BIODIVERSITY ASSESSMENT",
            
202
      "id": "55be16ac-bcb4-4c0d-bbdf-4458a9c7e860",
203
      "id": "55be16ac-bcb4-4c0d-bbdf-4458a9c7e860",
            
203
      "name": "BIODIVERSITY ASSESSMENT",
204
      "name": "BIODIVERSITY ASSESSMENT",
            
204
      "state": "active",
205
      "state": "active",
            
205
      "vocabulary_id": null
206
      "vocabulary_id": null
            
206
    },
207
    },
            
207
    {
208
    {
            
208
      "display_name": "BIOMONITORING",
209
      "display_name": "BIOMONITORING",
            
209
      "id": "941af5e5-e550-4178-bc69-9a7e7ab8d311",
210
      "id": "941af5e5-e550-4178-bc69-9a7e7ab8d311",
            
210
      "name": "BIOMONITORING",
211
      "name": "BIOMONITORING",
            
211
      "state": "active",
212
      "state": "active",
            
212
      "vocabulary_id": null
213
      "vocabulary_id": null
            
213
    },
214
    },
            
214
    {
215
    {
            
215
      "display_name": "DNA METABARCODING",
216
      "display_name": "DNA METABARCODING",
            
216
      "id": "656c05b8-489b-4f02-89b7-d57d1e295f21",
217
      "id": "656c05b8-489b-4f02-89b7-d57d1e295f21",
            
217
      "name": "DNA METABARCODING",
218
      "name": "DNA METABARCODING",
            
218
      "state": "active",
219
      "state": "active",
            
219
      "vocabulary_id": null
220
      "vocabulary_id": null
            
220
    },
221
    },
            
221
    {
222
    {
            
222
      "display_name": "ENVIRONMENTAL DNA",
223
      "display_name": "ENVIRONMENTAL DNA",
            
223
      "id": "db7d5622-d1fc-4d24-91f7-73842c6743b6",
224
      "id": "db7d5622-d1fc-4d24-91f7-73842c6743b6",
            
224
      "name": "ENVIRONMENTAL DNA",
225
      "name": "ENVIRONMENTAL DNA",
            
225
      "state": "active",
226
      "state": "active",
            
226
      "vocabulary_id": null
227
      "vocabulary_id": null
            
227
    },
228
    },
            
228
    {
229
    {
            
229
      "display_name": "SPATIAL ECOLOGY",
230
      "display_name": "SPATIAL ECOLOGY",
            
230
      "id": "a3db0ef8-4bc8-48ab-93d9-23d84a6c296a",
231
      "id": "a3db0ef8-4bc8-48ab-93d9-23d84a6c296a",
            
231
      "name": "SPATIAL ECOLOGY",
232
      "name": "SPATIAL ECOLOGY",
            
232
      "state": "active",
233
      "state": "active",
            
233
      "vocabulary_id": null
234
      "vocabulary_id": null
            
234
    }
235
    }
            
235
  ],
236
  ],
            
236
  "title": "Vertebrate and plant taxa recovered from 10 catchments in 
237
  "title": "Vertebrate and plant taxa recovered from 10 catchments in 
            
237
Vaud using an eDNA-metabarcoding approach",
238
Vaud using an eDNA-metabarcoding approach",
            
238
  "type": "dataset",
239
  "type": "dataset",
            
239
  "url": null,
240
  "url": null,
            
240
  "version": "1.0"
241
  "version": "1.0"
            
241
}
242
}